Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3018 |
Symbol | |
ID | 5079760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3499767 |
End bp | 3501194 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640500216 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_001184530 |
Protein GI | 146294106 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain [COG2202] FOG: PAS/PAC domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATAATG ATGAATACAC TTCCCTAAGT CAGTTTATTG ATCTGCTGTT GGATGCGATC TGTGTTGTCG ATAAAACGGG GCGGTTTGAA TTTGTTAGTG CAGGAGCAGA ACGAATTTTT GGTTACACCC CAGAAGAAAT GATTGGTATG CAGATGCTAG AGCTTGTATT ACCTGAAGAT AGAGAGCGCA CGTTAGCGAC AGCTAAAGAA ATTATGGATG GTCGTTTTAA GGTTGACTTT GAAAATCGCT ATGTGCGAAA AGATGGTTCA ATAGTCGATA TTCTTTGGTC TGCTCGTTGG TCAGAGGACC ATCAGCAGCG TGTCGCTGTT GCTCGAGATA TTACGAAGAG AAAAAATGCC GAGCGTAGAC AGGCGGCCTT GTATGAAATC TCAGAAGCTG TGCATGTGAC AGAGGATTTA CTGGCACTAT ACCAACATAT TCACCAAATT ATGGCAAAGT TACTCCCAGC AGAGAATTTT GCTATTGCAC TTTATGATCT AGATTTACAA GAGCTTAGTT TTCCGTATCG GGTTAGCACC CAAGAAAACT CGGCTGTAGA CATCGAAAGT TTTCGCGTAT TTACTGAACA AGTGATCCAA AATGCAGAAT CGATATTACT TTGCCCTATT AGCTTAAACG AGTATCCAAA AGGCGCCGCA GCCGAGTTAG GTAATAGCCG TTTAAGCTGG CTTGGCGTAC CGCTTAAGTT ACAAAAAGGG GTTATTGGTG CGTTAATGAT GCATACCGAC CCGACTTCTG CACCTTATAC ATATCAAGAT TATGAGTTAG TTGAGTTTGT TTCAACCCAA ATAGCCTTTG CTATTGAACG TCGACAAATG CTAGCTCGCC TAGAGCATAT TGCTTTGTAT GATCAATTAA CTCAATTACC GAATCGAGCG TTGTTTTACG ATAGGTTCCA AAAAGCCCTA TCTCGGGCTC ATCGGGAAGG GAGTTATTTT TCCTTACTGT ATTTGGATCT TGATAAGTTT AAGTGGGTAA ATGATACCTA TGGACACAGT GTTGGGGATT TATTACTGCA AGTGACAGCG CAGCGTATAC TTGGCTGTGT GAGAGCCTCT GATACAGTTG CCCGTTTTGG TGGCGATGAA TTTGTGATTT TACTCGAACG AGTTGATTCT GCTAAAAATA CCTTAGTAAC GGCTCAAAAG ATTTTACAAG TACTTAATCA ACCCTTTGAG CTTATTGATC AGCAAGTTCA AATATTACCT AGCATCGGCA TTGCTATGTA TCCGGAACAT GGTATCGATG AGAAACAACT GATTTCCTGT GCAGATACGG CTATGTATAA GGCCAAAAAG AACGGTGGTA ATCGTATTGA GATGGGATAT CAAGGTTTAA GATCTATCTT TGTTGATACG ATACTGCCGC TCGAGCTACA CCCCACTAAT GCTAAAAAAG TCATTTAA
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Protein sequence | MNNDEYTSLS QFIDLLLDAI CVVDKTGRFE FVSAGAERIF GYTPEEMIGM QMLELVLPED RERTLATAKE IMDGRFKVDF ENRYVRKDGS IVDILWSARW SEDHQQRVAV ARDITKRKNA ERRQAALYEI SEAVHVTEDL LALYQHIHQI MAKLLPAENF AIALYDLDLQ ELSFPYRVST QENSAVDIES FRVFTEQVIQ NAESILLCPI SLNEYPKGAA AELGNSRLSW LGVPLKLQKG VIGALMMHTD PTSAPYTYQD YELVEFVSTQ IAFAIERRQM LARLEHIALY DQLTQLPNRA LFYDRFQKAL SRAHREGSYF SLLYLDLDKF KWVNDTYGHS VGDLLLQVTA QRILGCVRAS DTVARFGGDE FVILLERVDS AKNTLVTAQK ILQVLNQPFE LIDQQVQILP SIGIAMYPEH GIDEKQLISC ADTAMYKAKK NGGNRIEMGY QGLRSIFVDT ILPLELHPTN AKKVI
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