| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3016 |
|---|
| Symbol | |
|---|
| ID | 5079758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 3494904 |
|---|
| End bp | 3497537 |
|---|
| Gene Length | 2634 bp |
|---|
| Protein Length | 877 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640500214 |
|---|
| Product | aminopeptidase N |
|---|
| Protein accession | YP_001184528 |
|---|
| Protein GI | 146294104 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | [TIGR02412] aminopeptidase N, Streptomyces lividans type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATTTGT TTAAAACTAG CCTAATTGCC TTAACCTGTG GCGCATTAAT GTCATGTGCC
ACCCAAAGCA CGCTTAATAC AGGCCCTAGA GATGCCAGCC CGTATATCAG CCAGTATCAG
GCAAGCCTGC GATCGCAGGT AATTTCAGAT GTCCGCTATG AACTGGATTT TCAACTGACA
GGTGAAACAG AATTCTCTGC CAGCACTAAG GTCACTTTTC GTTTAAGTGA AGTACCAAAA
CAGCTGAGTT TAGATTTAAG CAAAGCCCAA ATAAAACGCT TTACTATCAA CGGCACTGCC
GTTTACCCCA ACTACAATGG TGCCTATATC AGCCTAAATC CACGTTTACT CACCTCGGGC
GAGAACACGG TGGAAGTACA ATTTACCCGC GCACACAGCA CCAATGGCGA AGGCTTACAT
CGTTTCCAAG ATCCTGTCGA TGGAAAGGTC TATCTTTATT CCCATTTTGA ACCCGCTGCT
GCCCAGCAAA TGTTTGCCGT ATTTGACCAG CCCGATCTCA AAGCCAATTA TCAAATTACC
GTTACGGCCC CTAAAGATTG GCAAGTGATA AGCACGATGC GTGAAACGAG CGTCACCCCA
GCAGGCGCCT TTAATCGCTG GGAGTTTCCG CAAACCCCCA AATTAAGCCC GTATAATTTT
TCGATGCATG CCGGACCTTA TCATATGTGG CAAGATAACT CTGGCCGCTA TCCGATGCGA
TTATTTGCAA GGGAATCAGT GGCAAAACAA GTTACGCCAG AAGATTGGTT CACCTATACC
AAACAAGGAT TGACCTTCTT CGATAACTAC TTTGGTATCC CTTATCCCTT TAAAAAGTAT
GATCAACTTC TCGTGCCTGA TTTTCTCTAT GGCGCAATGG AAAATGCAGG CGCAGTCACC
TTTGCAGAAG ATCATTTTCT TTACAAAGCT GCGATGACAG CGGATCAAAA GCAGAGTTTG
GCAAGTGTTA TCATGCACGA AATGGCACAC CAATGGTTTG GCGATCTTGT CACCATGAAA
TGGTGGAATG GCCTGTGGTT AAACGAAAGT TTTGCCTCTT TTATGGGGAT GCTAGCGACC
CAAGAAGCAA CCGAATTTAC CAATACTTGG CGTAGTTTTT ACGCCCTAGG TAAACAAAAA
GCCTATGAAC AAGACAGCTT AGTGACGACA CATCCCATTG AAGTGCCTGT GGCTACCACC
CAAAATGCCT TCGATAATAT TGATGCCATC ACCTACCAAA AGGGGGCATC GACCCTAAAG
CAATTACAAC ACTTATTAGG TGATATGGTA TTTAGGCGTG GTGTAAGCAA CTACCTAAAA
GAGTACAGCT ATAAAAATGC GGAACTTGAC GACTTTATCA ATAGCCTAGC TAACGCTGCT
GGCCGTGATT TAAAGGTATG GACGCAGGAA TGGCTCTATA GTGCTGGGGT CAATACCATC
AAAGCCGACT ACCGCTGCGA AGGTAATCGT ATTACTGAAT TTAATCTATT ACAGTTCCCC
GCCAGTGCCG ACCTTCCCAC ATTGCGTGAA CAAAAGGTTC AAGTCGCTTT ATTTACTCAA
GGGCGATATG ACCTCAGAAA TGAGATTACC GTCCCCGTCA CTTATAAAGG GGCTCGTACC
GAAGTCAAAC AACTGGTCGG CGAACGCTGC CCCGATTTAG TGTATCCAAA CTTTGATGAT
TGGGGCTTTG TTAAAGTAGC ACTCGATGAC AAATCCTTTA CTACGGCAAA ACAACAACTG
AGTAATGTGT CAGATCCCCT GCTACGCTCC ATGCTCTGGC AGAGTCTCTG GGACAGTGTG
CGTGAAGGCC ATTTAAGTTT AGAGCAATAC CTCAGCACAG TATTTGTAAA TGCACCAGCA
GAGGCAGATT ACACCGTTGT CGGTCAAATT ATTTCGAGTC TATTGAGCTC AAAAGAATAC
CTCGCGCAAA TCGCCCCCAT TCAACAAAAT TATGCCGAAA ATGCAGTGAA AGGCTTAACT
CAAATGAGCC TTAGAAAAAC CATGGAAAGC AGGGGCGATA ATGATTTCCA GCGCCGTTGG
TTTAATGCCT ATATAAAACT GGCAAGCGAT CGCGATTCAC TGCGCCATCT CGCACAACTG
TTAGATGGGA CTTCGAAAAT TAAAGGTTTA ACCCTAGATC AAGATTTACG CTGGGCAATT
ATTACTCAGC TGAATCGCTA TGACTTCCCT AATGCCTTGC AACGCTTGAC TCAAGAAGCG
GCAAAGGATA ACTCAGACTC AGGCCAGAAA GCCGCCCTCG CAGCAGAGGT TATCCGTCCA
GAAGCAACAG CCAAACGCCG CTGGTTAAGT AAAGTCCACT TAGATGCATT GCCTTTCGCT
AAACAGCGTA TCGTGATGGA AAACTTGTAC CCTGCGGAGC AAAAACTGCT CAGTGCTGCC
ACAGCAGAAG AACGCTTGGC AAACCTTATC GATATGGATA AAAAGGGGCC GGTTTTTATG
CGTAGCTATA ACCATAATTT GATCCCAACT GACTGCAATT ACACAAGTAT TGCCGCATTG
GATAAAGTGC TGGATAGCCA GACAGGTTTA ACCAACCTCA CCCGCCGCGC CTTGCTCGAA
AAGCGCCAAA GAGAACAGCA ATGTGTACAA ATAAAAAATA AAATGACCCA TTAA
|
|---|
| Protein sequence | MNLFKTSLIA LTCGALMSCA TQSTLNTGPR DASPYISQYQ ASLRSQVISD VRYELDFQLT
GETEFSASTK VTFRLSEVPK QLSLDLSKAQ IKRFTINGTA VYPNYNGAYI SLNPRLLTSG
ENTVEVQFTR AHSTNGEGLH RFQDPVDGKV YLYSHFEPAA AQQMFAVFDQ PDLKANYQIT
VTAPKDWQVI STMRETSVTP AGAFNRWEFP QTPKLSPYNF SMHAGPYHMW QDNSGRYPMR
LFARESVAKQ VTPEDWFTYT KQGLTFFDNY FGIPYPFKKY DQLLVPDFLY GAMENAGAVT
FAEDHFLYKA AMTADQKQSL ASVIMHEMAH QWFGDLVTMK WWNGLWLNES FASFMGMLAT
QEATEFTNTW RSFYALGKQK AYEQDSLVTT HPIEVPVATT QNAFDNIDAI TYQKGASTLK
QLQHLLGDMV FRRGVSNYLK EYSYKNAELD DFINSLANAA GRDLKVWTQE WLYSAGVNTI
KADYRCEGNR ITEFNLLQFP ASADLPTLRE QKVQVALFTQ GRYDLRNEIT VPVTYKGART
EVKQLVGERC PDLVYPNFDD WGFVKVALDD KSFTTAKQQL SNVSDPLLRS MLWQSLWDSV
REGHLSLEQY LSTVFVNAPA EADYTVVGQI ISSLLSSKEY LAQIAPIQQN YAENAVKGLT
QMSLRKTMES RGDNDFQRRW FNAYIKLASD RDSLRHLAQL LDGTSKIKGL TLDQDLRWAI
ITQLNRYDFP NALQRLTQEA AKDNSDSGQK AALAAEVIRP EATAKRRWLS KVHLDALPFA
KQRIVMENLY PAEQKLLSAA TAEERLANLI DMDKKGPVFM RSYNHNLIPT DCNYTSIAAL
DKVLDSQTGL TNLTRRALLE KRQREQQCVQ IKNKMTH
|
|---|
| |