Gene Sputcn32_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3005 
Symbol 
ID5079900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp3483600 
End bp3484322 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content41% 
IMG OID640500203 
Productabortive infection protein 
Protein accessionYP_001184517 
Protein GI146294093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.310421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATG TCGTTATTGT CGCTCTAATA GCATTTGTGC TTGAGCGTAA AGGCATAGTT 
AAAATTAATT TTGTATGGAT TATGGTGGCG CTGGCACTGA TCTTTCTATA TGGCGTTGCG 
CTTTTTAATG GTGGGAAATG GATCCCATTG AATGATTATT TTACTGATTT ACAATGGAAT 
TGGGGCGGTA AAATTGCAGC AATCCTACTT TGGGTGCTGG CATTATTCGC ATTATGTTTA 
AGTCAGAAAC AATTTAAAAT TGCCGAGGCA GGTTTTACGT TTAAGCAACA TCACGGCGCC 
ATGATTCCCT CCCTTGTCGT GATTATGTTT TTTATCGTGC TGCAATTACT CTTGTCTTAC 
ACTCTGGGTA ATGGCCCAGA TTATGATGCT GAGGAGCTTT GGTACCAGGC GACAATGCCA 
GGGCTTGATG AAGAACCTAT GTTTCGAGGC GTACTGCTCT ATATTGTCTC GTTAGCCATA 
GTGTCGAGTC GGATAAATCT GTTGGGTGCG CAAATAAATG TCGCTGGATT GCTATTAGTG 
CTGTTATTCG GTCTTATTCA TGGTCTTATG TATAACGCTG GCGAATTTCA TTTCTCTCTG 
ATGTCGATGT CATTAACTGG CTTTTATGGC TTGATTTTAC TGTGGTTAAG GGAAAGAACG 
GGGAGCTTAG TTTTCCCCAT CTTAGCGCAT AATCTGGTGA ATTTTGCTGG CCAATTTGTA 
TAA
 
Protein sequence
MINVVIVALI AFVLERKGIV KINFVWIMVA LALIFLYGVA LFNGGKWIPL NDYFTDLQWN 
WGGKIAAILL WVLALFALCL SQKQFKIAEA GFTFKQHHGA MIPSLVVIMF FIVLQLLLSY 
TLGNGPDYDA EELWYQATMP GLDEEPMFRG VLLYIVSLAI VSSRINLLGA QINVAGLLLV 
LLFGLIHGLM YNAGEFHFSL MSMSLTGFYG LILLWLRERT GSLVFPILAH NLVNFAGQFV