Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2991 |
Symbol | |
ID | 5079886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3468181 |
End bp | 3468921 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640500190 |
Product | ABC transporter related |
Protein accession | YP_001184504 |
Protein GI | 146294080 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATCAA TGAAGAATGT GAGCAAGGTT TTTAAAACGG ATCTCGTTGA AACCCACGCC CTGCGCGATT TTAACCTCGA GGTGAACGAA GGCGAATTTG TCGCGGTAAC GGGTCCTTCA GGCTCAGGTA AAACCACCTT TTTAAATATC GCAGGTTTAC TCGAAGGCTT TACCCATGGT GATTATTTTC TCGATGGGAT TAACGTGTCT AACTTGAGCG ATAACAAGAG CGCTACTGTC CGTAATGAGA AAATTGGCTT TATTTTCCAA GGTTTTAATT TAATTCCCGA TCTTAACTTA GCTGAGAATA TTGAAGTGCC GCTGCGCTAC CGTGGCTTTA ATGCCAAGGA GCGTCAACGC CGCGTACAAG AGGCATTAGA GCAAGTGGGC CTAGCTTCAC GCCTCAAGCA TTTACCTACG CAGTTGTCGG GCGGACAGCA ACAAAGGGTG GCGATAGCTC GGGCATTGGC GGGTAAGCCA CGCTTCCTGC TCGCCGACGA ACCCACAGGA AACCTCGACA GCCTAATGGC CCGTCAAGTG ATGGAATTAC TTGAAAATAT CAACCAAGCG GGCACGACCA TCATTATGGT GACGCACGAT CCTGAACTCG CTCGTCGCGC CCAACGCAAT ATTCAAATTG TCGATGGCCA AGTGTGTGAT TTTACGATGT ATCAGCCCCG TGGCAGCGCA CAAATTGCGA CGACAGAGCC ACTAGACAAA CTTGTCGCTA ACGCAGACTA A
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Protein sequence | MLSMKNVSKV FKTDLVETHA LRDFNLEVNE GEFVAVTGPS GSGKTTFLNI AGLLEGFTHG DYFLDGINVS NLSDNKSATV RNEKIGFIFQ GFNLIPDLNL AENIEVPLRY RGFNAKERQR RVQEALEQVG LASRLKHLPT QLSGGQQQRV AIARALAGKP RFLLADEPTG NLDSLMARQV MELLENINQA GTTIIMVTHD PELARRAQRN IQIVDGQVCD FTMYQPRGSA QIATTEPLDK LVANAD
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