| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2987 |
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| Symbol | |
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| ID | 5079882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3462339 |
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| End bp | 3464027 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640500187 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001184501 |
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| Protein GI | 146294077 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAATTC GAACTAAAAT TATCATTTAT TCAATAGCGT GCTGTGCCTT TGGCGTATTA
TTGAGTTTTG CCTTGGTGAA ATATATTTTA TCCGAGGCAT CAGTTGTTGC CACGCCTCAC
GCGATTAAAA CCCCTGATAA TAATGTCACG TTTGACTTTG CTGAGCTTGA AAAAAACCTC
GCGTCTATCG AACTCGCCCT TAACAATAGT GAGCCATTGC AGCAGGCCGC AGCAATGCAA
GCGCACCAAA GGGCTGAGCA GATTAAGGCT GAACTGCAAA AGCTTGAACA ACTTAAACAA
GCACAGTTAC AGATAAAACT TTTTACCTTA GAACAGCTTA AAGAAGGGGC ATTTAATTCT
ATGCCTCATA TTGTTGAGCC TTTACGTGTC GAGCCACTAT CCATTTTACC GCCTAAAGCC
CCCGTATCCT CTGTTGCGCC CGCGGAGATA GTCGCCAGTG AACCTGCCGC TAGTTTGACC
TTAGGTGAGG GGGTGATTGT GTTATTGCTC GCCTGCTGTG TCTGTGGTTT AGGCATTGCT
TGGTTGACTC GACATCTTGG CCGCAGTTTA GATTCCCTTG AAGTCGGCTT GCTCAATTTT
AGTGATAATG ATTTTAGTGT GAGTATTCCT GAACATGGTG AAGGGCAACT CAAAACCTTA
GCGCAGTTAT TTAATCATAG CGCGGCTAAA TTGCGCCAAG AAAGGCAATA CATTTATCAA
CGTGAGTTAT TGCTGGATAA GGTGATTCAG AGTTCCCCCA ATGTGATGTT ATTGCTCGAT
GACCATCAAC GGCTCATTTA CGCCAATGAT GCCGCGCGTC ACCTATTTCA TAAAAAGGGC
AGAATGGAAG GCTTGAGCTT AGATGAATTA CTGGTGGATT TGCCCGAGGC ATTGGCCTTA
GCACTTAAAC ATGAAAAGAA CGGCCTCTTT GCCATGGGCG AAGATGAGAT GGAAACTTGG
TATATCAGCC GTGGTCAGTT TTTATTGAAT AACCAACAGC ATAACTTAAT CTTGCTCAAA
CAGATGACTC GAGAACTCAA TCGTCAAGAG GTGGCTGTGT GGAAAAAAGT CATCCGCATT
ATAAGCCATG AACTCAATAA CTCCGTCGCG CCCATTGCTT CTATGGTCAA TTCGGGCCGT
CTACTCACTC AAGATATAGA TGATCCTAGG TTAACCTTAA TTTTCGATAC GATTGAGAAT
CGCACTAATC ATTTAAGTCA GTTTATCTTC AACTATGCTC GCTTCGCTAA GTTGCCGCTT
CCACAGCGGT GTCAGGTGAG TTGGGCGCAA TTTACCGCCC AGTTAACCCA GCATTATCCC
TTTAAACTTA AGGATGATTT GCCTGAGATC GATGGCTATT TTGACCAAGG ACAGATGGAG
CAAGTGCTCC TTAATTTACT GAAAAATGCC CATGAATCTG GTTCAAACCC CGAGGACGTC
ACCTTATCGA TTCGATATCA AACCTTAGTG GATGGCGCGG GTTTCAGTAT TGCGATTGAG
GATCGCGGCG CAGGTATGTC TGGCGAAGTA TTAGAGCAGG CGCTATTACC ATTTTACTCA
ACAAAACAAT CGGGTACAGG CTTAGGTTTA CCTTTGTGTC GTGAAATTAT TGAAGCCCAC
GATGGCTGTA TTAGCATGCA TAATCGCAGT GACGGTGGCC TGTTGGTTCG ACTATGGTTG
CCACAATAA
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| Protein sequence | MLIRTKIIIY SIACCAFGVL LSFALVKYIL SEASVVATPH AIKTPDNNVT FDFAELEKNL
ASIELALNNS EPLQQAAAMQ AHQRAEQIKA ELQKLEQLKQ AQLQIKLFTL EQLKEGAFNS
MPHIVEPLRV EPLSILPPKA PVSSVAPAEI VASEPAASLT LGEGVIVLLL ACCVCGLGIA
WLTRHLGRSL DSLEVGLLNF SDNDFSVSIP EHGEGQLKTL AQLFNHSAAK LRQERQYIYQ
RELLLDKVIQ SSPNVMLLLD DHQRLIYAND AARHLFHKKG RMEGLSLDEL LVDLPEALAL
ALKHEKNGLF AMGEDEMETW YISRGQFLLN NQQHNLILLK QMTRELNRQE VAVWKKVIRI
ISHELNNSVA PIASMVNSGR LLTQDIDDPR LTLIFDTIEN RTNHLSQFIF NYARFAKLPL
PQRCQVSWAQ FTAQLTQHYP FKLKDDLPEI DGYFDQGQME QVLLNLLKNA HESGSNPEDV
TLSIRYQTLV DGAGFSIAIE DRGAGMSGEV LEQALLPFYS TKQSGTGLGL PLCREIIEAH
DGCISMHNRS DGGLLVRLWL PQ
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