Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2984 |
Symbol | |
ID | 5079879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3460421 |
End bp | 3461227 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640500184 |
Product | curli production assembly/transport component CsgG |
Protein accession | YP_001184498 |
Protein GI | 146294074 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTCGTT TAGTGTTAGT GAGTTTATGG TTATTAAGCC TGTCGGCCTG CAGTTTGATC CCTAAACCTG ATTTGAATAT CACGGCTGCC GAGGTTAACC CTTTAAGTGA AGTGATGCGT GGATTACAAG CTCAGCCTGG GCCTAAGTTC CCCATTCCTG TCGCTGTATA TTCCTTTCGC GATCAAACGG GACAATATAA ACCACAGGCT AACGTGAGTT CGTTTTCGAC CGCGGTGACT CAGGGCGCAA CGTCGATGTT GATGCAGACT TTGCTCGACT CTAAATGGTT TACACCTGTG GAGCGTGAAG GGCTGCAAAA TTTGCTTACC GAGCGCAAGA TCAGCAATAA ACAAACGGGA ACTAAGGGCG ATGACGTACC TGTATTGTCT ACTGCCAGAT TGTTGCTTGA AGGTGGGATC ATCAGCTATG AGACTAACAC CAGTACGGGA GGTGCGGGCG TTGAGTATTA CGGCATTGGT GCCTCTGAAA TGTACCGTGA AGATCTGGTG ACGATTTATC TGCGTGCGGT CGATGTGCAC ACGGGTAAAG TGATGATGTC AGTCTCAACC AGTAAGCGTG TTTTATCCCA AGAAATGCGT GCGGGGTTAT TCCGTTACAC GAGTTTAAAT CGCCTTGCCG AGGCAGAAGT CGGTTTTACT ACCAATGAAC CGGTGCAATT TTGTGTGTTG CAGGCCATTG AATTGGCGGT CGCTGAGATG ATTGATAAGG GCATCAAACA AGGTTACTGG AGCCCAACTC AAGTCACCCA GCCAGCCGAA AAAGCGCAGG AGTTGAGTCA GAGTTAA
|
Protein sequence | MARLVLVSLW LLSLSACSLI PKPDLNITAA EVNPLSEVMR GLQAQPGPKF PIPVAVYSFR DQTGQYKPQA NVSSFSTAVT QGATSMLMQT LLDSKWFTPV EREGLQNLLT ERKISNKQTG TKGDDVPVLS TARLLLEGGI ISYETNTSTG GAGVEYYGIG ASEMYREDLV TIYLRAVDVH TGKVMMSVST SKRVLSQEMR AGLFRYTSLN RLAEAEVGFT TNEPVQFCVL QAIELAVAEM IDKGIKQGYW SPTQVTQPAE KAQELSQS
|
| |