Gene Sputcn32_2971 details

Gene Information

• Locus tag: Sputcn32_2971
• Symbol: dnaK
• ID: 5079866
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: -
• Start bp: 3447265
• End bp: 3449184
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640500171
• Product: molecular chaperone DnaK
• Protein accession: YP_001184485
• Protein GI: 146294061
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAAAA TTATTGGTAT CGACTTAGGC ACAACAAACT CTTGTGTAGC TGTCCTCGAT 
GGTGGCAAAG CGCGTGTGTT AGAAAATGCT GAAGGCGATC GCACAACCCC GTCAATCATC 
GCTTATACAG ACGATGAAAC CATTGTCGGT TCGCCTGCAA AACGTCAAGC AGTGACTAAC 
CCGACTAACA CATTCTTCGC AATTAAGCGT TTGATTGGTC GTCGTTTTAA AGATGACGAA 
GTTCAACGTG ATGTGAACAT TATGCCATTC AAAATCATCC AAGCCGACAA CGGTGATGCT 
TGGGTTGAAT CGCGTGGCAA CAAAATGGCA CCACCACAAG TTTCTGCTGA AATCTTGAAA 
AAGATGAAGA AAACCGCAGA AGACTTTTTA GGTGAAGAAG TGACAGAAGC GGTTATTACC 
GTACCTGCTT ACTTTAACGA TTCACAACGT CAAGCGACTA AAGATGCGGG TCGTATCGCA 
GGTCTTGATG TTAAACGTAT TATCAACGAA CCCACTGCAG CGGCATTAGC TTACGGTATT 
GATAAGAAAC AAGGCGACAA CATTGTTGCG GTATACGATT TAGGTGGTGG TACATTCGAT 
ATCTCTATCA TCGAGATCGA CAGCAACGAT GGTGACCAAA CATTTGAAGT GTTGGCAACT 
AACGGTGATA CCCACTTAGG TGGTGAAGAC TTTGACAACC GTTTGATCAA CTACTTAGCT 
GACGAATTCA AGAAAGAGCA AGGCTTAGAT CTGCGTAAAG ATCCATTAGC AATGCAACGT 
CTGAAAGAAG CGGCTGAAAA AGCAAAAATT GAACTTTCAA GCACCAACCA CACTGAAGTG 
AACCTGCCAT ACATCACGGC AGACGCAACA GGTCCTAAGC ATTTAGTGAT TAAAATCACT 
CGTGCTAAGT TGGAATCACT GGTTGAAGAC TTGATTCTCC GCACATTAGA GCCATTAAAA 
GTTGCTCTGG CGGATGCAGA TTTATCCGTA TCAGACGTTA ACGAAGTGAT TCTGGTGGGT 
GGTCAAACCC GTATGCCTAA GGTTCAAGAA GCGGTGACAA ACTTCTTCGG CAAAGAACCT 
CGTAAAGACG TTAACCCAGA CGAAGCGGTA GCTGTAGGTG CTGCGATTCA AGCGGGTGTA 
TTGTCAGGCG ACGTGAAAGA CGTATTACTG TTAGACGTGA CGCCACTGTC TCTGGGTATC 
GAAACCATGG GCAGCGTGAT GACTAAGTTG ATTGAGAAAA ACACGACTAT TCCGACTAAG 
GCACAGCAAG TGTTCTCAAC CGCCGATGAC AACCAAAGTG CAGTGACCAT TCACGTACTG 
CAAGGTGAGC GTAAGCAAGC GAGCGCGAAC AAGTCATTAG GTCAGTTCAA CTTAGACGGT 
ATTGAGCCAG CACCACGTGG CCAGCCACAA ATTGAAGTGA TGTTCGACAT CGACGCTGAC 
GGTATTCTGC ATGTGTCTGC GACAGACAAG AAAACCGGCA AGAAACAAAA CATCACCATC 
AAAGCCTCTT CTGGTTTAAG TGAAGAAGAA GTGGCGCAAA TGGTACGTGA TGCTGAAGCG 
CACGCAGATG AAGACAAGAA GTTCGAAGAA CTAGTGCAAG CACGCAACCA AGCTGACGGC 
TTAGTCCACG CGACTAAGAA ACAAGTTGAA GAAGCGGGCG ATGCATTGCC AAGCGAAGAT 
AAAGAGAAAA TCCAAGCTGC AATGGCCGCT GTAGACACTG CTACTAAAGG CAATGACAAA 
GAAGCCATTG AAAAGGCAAG CCAAGAATTA ATCGAAGCGT CTGCTAAGCT GATGGAAATT 
GCTCAAGCTA AGTCTCAAGC CCAAGGTGGT GCAGAGACCA ATGCTGGCAA ACAGGCTAAC 
GCTGCTGCCG ATGATGTTGT CGATGCTGAA TTTGAAGAAG TGAAAGACGA CAAGAAGTAA 

 

Protein sequence

MGKIIGIDLG TTNSCVAVLD GGKARVLENA EGDRTTPSII AYTDDETIVG SPAKRQAVTN 
PTNTFFAIKR LIGRRFKDDE VQRDVNIMPF KIIQADNGDA WVESRGNKMA PPQVSAEILK 
KMKKTAEDFL GEEVTEAVIT VPAYFNDSQR QATKDAGRIA GLDVKRIINE PTAAALAYGI 
DKKQGDNIVA VYDLGGGTFD ISIIEIDSND GDQTFEVLAT NGDTHLGGED FDNRLINYLA 
DEFKKEQGLD LRKDPLAMQR LKEAAEKAKI ELSSTNHTEV NLPYITADAT GPKHLVIKIT 
RAKLESLVED LILRTLEPLK VALADADLSV SDVNEVILVG GQTRMPKVQE AVTNFFGKEP 
RKDVNPDEAV AVGAAIQAGV LSGDVKDVLL LDVTPLSLGI ETMGSVMTKL IEKNTTIPTK 
AQQVFSTADD NQSAVTIHVL QGERKQASAN KSLGQFNLDG IEPAPRGQPQ IEVMFDIDAD 
GILHVSATDK KTGKKQNITI KASSGLSEEE VAQMVRDAEA HADEDKKFEE LVQARNQADG 
LVHATKKQVE EAGDALPSED KEKIQAAMAA VDTATKGNDK EAIEKASQEL IEASAKLMEI 
AQAKSQAQGG AETNAGKQAN AAADDVVDAE FEEVKDDKK