| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2961 |
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| Symbol | cobT |
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| ID | 5079856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3432296 |
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| End bp | 3433348 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640500161 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_001184475 |
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| Protein GI | 146294051 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAAT CAGCCGTGTC GTTTCAAATT AACTCTGTGA GCAAAGTACA AGAACAGTTG
ATTCAACAGA AAATAAATCT TAAGACTAAG CCGCTTGGCG CCCTCGGGCA GCTCGAATCC
TTAGCATTAC AAATAGCTCG CATACAGGGT GCTGATCAGC CATATATAGC GAATCCCACC
ATGCTGGTGT TTGCGGGTGA CCATGGCATT GCAGCAGAAG GCGTTTCCAT TGCCCCTAGT
GAAGTGACGC GCCAAATGGT GCAAAACTTT GCCCATGGCG GTGCGGCAAT TAATGTTTTT
TGTCGGCAAG TTGGCTTTAA GCTCGAAGTG ATCGATTGCG GTATTTTAAC GCCTATCGAA
GGGGTTAAAG GCATTATTGA TCAACGTCTT GGCGCAGGAA CGGGCGCTAT TCATTTAGAG
CCTGCTATGG CGCTGGAAAC CGTCGATAAA GGCTTTGCGA TGGCGCGTGA TTTGATTGAA
CGCCACCACC AAGCGGGCTG TAATCTGGTG GCCTTTGGCG AGATGGGCAT AGGCAATACC
TCTGCCGCAT CTGCGATTAT GGCGGCGATA ATGCAGCTCG ATGTGATTGA TTGTGTTGGC
CGTGGTACTG GCATTAATCA AGAAACCTTA GCGCGAAAAT TGATGCTGAT TGAGCTAGCG
TTATTGCTAC ATCAAAGTGC GTTAACTGGA CCAAAAGAAG TGTTGGCGTG TTTAGGTGGT
TTTGAAATTG TGCAGATGAC AGGCGCTATG TTAGCCGCCG CCGAGCGTAA CATGCTGGTG
GTTGTGGATG GTTTTATCGC GACTGCCGCT GCATTAGTCG CAGTAACAAT AGCGCCTAAT
GTGCGCGACT ATTTGATTTT TGCCCATCAA TCCGATGAGC AAGGCCATCT GCGAATGTTA
GAATTTTTGC AGGCTAAACC TTTGCTATCG CTTGGCCTAA GATTAGGCGA AGGCACTGGT
GCAGCCTTGG CTCTACCGCT TATCCAAGCA GCAGTAAATT TTTACAATCA AATGGCGAGT
TTTAGTGATG CGGGGATTGA GGCTGTTGTA TGA
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| Protein sequence | MSQSAVSFQI NSVSKVQEQL IQQKINLKTK PLGALGQLES LALQIARIQG ADQPYIANPT
MLVFAGDHGI AAEGVSIAPS EVTRQMVQNF AHGGAAINVF CRQVGFKLEV IDCGILTPIE
GVKGIIDQRL GAGTGAIHLE PAMALETVDK GFAMARDLIE RHHQAGCNLV AFGEMGIGNT
SAASAIMAAI MQLDVIDCVG RGTGINQETL ARKLMLIELA LLLHQSALTG PKEVLACLGG
FEIVQMTGAM LAAAERNMLV VVDGFIATAA ALVAVTIAPN VRDYLIFAHQ SDEQGHLRML
EFLQAKPLLS LGLRLGEGTG AALALPLIQA AVNFYNQMAS FSDAGIEAVV
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