Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2943 |
Symbol | |
ID | 5078170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3414285 |
End bp | 3415094 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640500143 |
Product | peptidase M48, Ste24p |
Protein accession | YP_001184457 |
Protein GI | 146294033 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0341999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAA AACGATTAAG CTTGATGGTG ATCACTGTCA TGCTCGGATT ATCGGCCTGT GCAACCACAA AATCGCCAAC AGGAAGGGGT CAGACTCTGT TGTATTCATC AGCGCAAATG CAGCAGATGG GTGATGCCTC TTTTGAAGAG ATGAAAAAGC AACTGAAGGT GAGTAACGAT AAAAAGCTGA CACAATATGT TAATTGTGTG GCTAGCCGCA TTACGGCGGT ATTGCCAGAT CAGACCCAAC GCTGGGATGT AGTATTGTTT GACTCTGAAC AGGTCAACGC GTTTGCCTTG CCGGGAGGCC ATATCGGTGT TTATACCGGA TTACTTAAAG TCGCTAATGG TCCTGATCAG CTTGCCACTG TTATTGGTCA CGAAGTTGCC CATGTACTGG CGCAACATGG GAACGAACAG GTGTCCCGTG GGCAGTTAAC GGGCGTTGGC ATGCAAATAG CCGATGCAGC GTTGGGGGCG AGTGGAGTGT CGAATCGTGA CTTGTATATG TCAGCTCTGG GGTTGGGTGC CCAAGTTGGG GTTATTTTGC CCTTTGGTAG AGCCCAAGAA AGTGAAGCTG ATGTGATGGG GGTAGAGTTG ATGGCGCGTG CAGGTTTTGA TCCCGCACAA AGTGTTGAAC TATGGCAAAA TATGTCGAAA GCGGGAGGAA GCCAAGGTAT TGAATTGTTA TCGACTCATC CATCAAACAG CAACCGTATT GCTCAGTTGC AACAACTTCA AAGCCAAATG CAACCGCTAT ATCAAAGCGC AAAGGTCAAT GTTAAAAACC AGTGTGTTGC ACCTAAATAA
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Protein sequence | MKSKRLSLMV ITVMLGLSAC ATTKSPTGRG QTLLYSSAQM QQMGDASFEE MKKQLKVSND KKLTQYVNCV ASRITAVLPD QTQRWDVVLF DSEQVNAFAL PGGHIGVYTG LLKVANGPDQ LATVIGHEVA HVLAQHGNEQ VSRGQLTGVG MQIADAALGA SGVSNRDLYM SALGLGAQVG VILPFGRAQE SEADVMGVEL MARAGFDPAQ SVELWQNMSK AGGSQGIELL STHPSNSNRI AQLQQLQSQM QPLYQSAKVN VKNQCVAPK
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