| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2938 |
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| Symbol | |
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| ID | 5078165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3407214 |
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| End bp | 3407924 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640500138 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001184452 |
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| Protein GI | 146294028 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATC CCGAAGATAG CATTACCCAA GTCGATACTT TTATTGCGCC GCCTTGCCTC
GGGCAAATAC GTGTGCTCTA TCAAGACAGC GATATTCTGC TGATTGATAA GCCGAGCGGA
TTATTAAGTT TATCGGGGAA GAATCCGCTG AATCTCGACT CAGTGCATTA TCGTTTAGTG
CAGGATTTTC CGACGGCCAC GCTACTACAC AGACTCGATT TTGGCACTTC GGGCATCATG
CTGGTGGCAC TGAATAAAAC GGTTAATGGT TTGCTGACAA AACAGTTTCA GGCGCGCACG
GTTGAGAAGC GTTATACCGC ATTACTCCAT GGGCATCTCA CTGACGACAG TGGGGTGATT
AATCTGCCGA TCGCTAAAGA TGTCGACAAT TTCCCGCTAC AAAAAATTTG CCACAGCACA
GGTAAGCTTG CGATCAGCGA ATATCGGGTG CTTGAACGAT TACCGGAACC TTTTGCTACA
CGGGTAGAAT TTACCCCCGT TTCTGGCCGC ACTCATCAAC TTAGGATCCA CAGTCAGCAA
TTGGGACACT CGATTTTGGG GTGTGATCTG TATGGTGGGG TAGGTGAGAA GATAACAGAC
AACGATTATG CTCTACATCA TATAAGGTTA ATGCTGCATG CGACTCGCTT AGCCTTCGAC
CATCCAATAA CAGGCGAGCA TATCGATTGG ATTTGTAAGT GTCCTTTCTA A
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| Protein sequence | MSDPEDSITQ VDTFIAPPCL GQIRVLYQDS DILLIDKPSG LLSLSGKNPL NLDSVHYRLV
QDFPTATLLH RLDFGTSGIM LVALNKTVNG LLTKQFQART VEKRYTALLH GHLTDDSGVI
NLPIAKDVDN FPLQKICHST GKLAISEYRV LERLPEPFAT RVEFTPVSGR THQLRIHSQQ
LGHSILGCDL YGGVGEKITD NDYALHHIRL MLHATRLAFD HPITGEHIDW ICKCPF
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