Gene Sputcn32_2937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2937 
Symbol 
ID5078164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3406380 
End bp3407153 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content44% 
IMG OID640500137 
Producthypothetical protein 
Protein accessionYP_001184451 
Protein GI146294027 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTG CCACCAGAAT ACTGCTACCA ATCTTAGTGT TGATCGTGCC TACCATCATG 
GCCAATCCAC TGAATATATA TACCGAAGAA TGGTCACCGA TCAGCTTTTC TGTTGATGGT
AAACCCGATG GTTTAGCTGT ACAGGTCGTA CAAGAAATTC AAAAACGCAT CAAGAACCAA
GACCCAATTA AGGTCGTGCC ATGGGCTCGA GGTTGGAAAA TGCTGACCGA GCAACCTAAT
ACTGTGTTAT TCACTATGAC ACGCACGACA GAGAGAGAGC AGATGTTTAC TATGATTGGC
CCAGTTGCAA TTGGGACGAC TAATTTTTAT GCTCTAAAAA ACAGTGGGAT AAAAATTACC
AGTTTAGAGG ATGCGAAGTC AGCCAAAGCG ATTGGCGTTT ACCGCGCCTC AGTTGAAGAG
CGAATACTCC TCGAACAAGG GTTTACCAAT ATTGCAGCGT CTTCTACTCC GCTTTTAAGC
GCTAAGCAGC TCATAAAACA CCGTATCGAT CTCTGGTGTA ATGCTAATTT AACAGCACCA
AGCATACTTA CGGAGGCGGG TGCCAGTATT GATGATGTTG AATCCCTTTT TACGATTAGT
GCTAACCATC TATACATTGC TTTTTCTCGC GGCACCGCCA ATGAAGTGAT AGAACAATGG
AAAAATAGCC TCGCAGCGAT AAAAGCAGAT GGCACTTTTA AAACGATTTA TCATGCTTGG
CTCCCCATGG ATGAACCCCC CATGCAAACC GAACGGATAG GACCAGCCCA CTAA
 
Protein sequence
MKFATRILLP ILVLIVPTIM ANPLNIYTEE WSPISFSVDG KPDGLAVQVV QEIQKRIKNQ 
DPIKVVPWAR GWKMLTEQPN TVLFTMTRTT EREQMFTMIG PVAIGTTNFY ALKNSGIKIT
SLEDAKSAKA IGVYRASVEE RILLEQGFTN IAASSTPLLS AKQLIKHRID LWCNANLTAP
SILTEAGASI DDVESLFTIS ANHLYIAFSR GTANEVIEQW KNSLAAIKAD GTFKTIYHAW
LPMDEPPMQT ERIGPAH