Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2937 |
Symbol | |
ID | 5078164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3406380 |
End bp | 3407153 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640500137 |
Product | hypothetical protein |
Protein accession | YP_001184451 |
Protein GI | 146294027 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTG CCACCAGAAT ACTGCTACCA ATCTTAGTGT TGATCGTGCC TACCATCATG GCCAATCCAC TGAATATATA TACCGAAGAA TGGTCACCGA TCAGCTTTTC TGTTGATGGT AAACCCGATG GTTTAGCTGT ACAGGTCGTA CAAGAAATTC AAAAACGCAT CAAGAACCAA GACCCAATTA AGGTCGTGCC ATGGGCTCGA GGTTGGAAAA TGCTGACCGA GCAACCTAAT ACTGTGTTAT TCACTATGAC ACGCACGACA GAGAGAGAGC AGATGTTTAC TATGATTGGC CCAGTTGCAA TTGGGACGAC TAATTTTTAT GCTCTAAAAA ACAGTGGGAT AAAAATTACC AGTTTAGAGG ATGCGAAGTC AGCCAAAGCG ATTGGCGTTT ACCGCGCCTC AGTTGAAGAG CGAATACTCC TCGAACAAGG GTTTACCAAT ATTGCAGCGT CTTCTACTCC GCTTTTAAGC GCTAAGCAGC TCATAAAACA CCGTATCGAT CTCTGGTGTA ATGCTAATTT AACAGCACCA AGCATACTTA CGGAGGCGGG TGCCAGTATT GATGATGTTG AATCCCTTTT TACGATTAGT GCTAACCATC TATACATTGC TTTTTCTCGC GGCACCGCCA ATGAAGTGAT AGAACAATGG AAAAATAGCC TCGCAGCGAT AAAAGCAGAT GGCACTTTTA AAACGATTTA TCATGCTTGG CTCCCCATGG ATGAACCCCC CATGCAAACC GAACGGATAG GACCAGCCCA CTAA
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Protein sequence | MKFATRILLP ILVLIVPTIM ANPLNIYTEE WSPISFSVDG KPDGLAVQVV QEIQKRIKNQ DPIKVVPWAR GWKMLTEQPN TVLFTMTRTT EREQMFTMIG PVAIGTTNFY ALKNSGIKIT SLEDAKSAKA IGVYRASVEE RILLEQGFTN IAASSTPLLS AKQLIKHRID LWCNANLTAP SILTEAGASI DDVESLFTIS ANHLYIAFSR GTANEVIEQW KNSLAAIKAD GTFKTIYHAW LPMDEPPMQT ERIGPAH
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