Gene Sputcn32_2931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2931 
Symbol 
ID5078158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp3398452 
End bp3399114 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content45% 
IMG OID640500131 
Productribose-5-phosphate isomerase A 
Protein accessionYP_001184445 
Protein GI146294021 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.195055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAG ATGAAATGAA AAAAGCTGCT GGTTGGGCCG CGCTTAAGTA CGTTGAAGAA 
GGCAGTATTG TCGGTGTTGG TACAGGTTCG ACTGTAAACC ACTTTATTGA TGCACTCGCT 
ACCATGAAAG ATGATATCGA AGGTGCGGTT TCAAGCTCGG AAGCATCCAC TCAGAAAATG 
AAAGCGCTAG GAATTCCCGT TTATGACTTA AACAGCGTCG ATCGTTTATC TGTCTATGTA 
GACGGTGCCG ATGAAATCAA CGATCGTATG GATATGATCA AAGGTGGTGG CGCAGCATTA 
ACTCGCGAGA AAATTGTCGC GGCTGTAGCT GAGAAGTTTA TCTGCATCGT TGATAACACT 
AAACAAGTCA ACATATTAGG TGAATTTCCG CTACCCGTAG AAGTCATTCC AATGGCACGC 
TCTTATGTAG CGCGTCAACT TGTTAAACTT GGCGGCGATC CTGTGTACCG TGAAGGCGTT 
GTTACCGATA ACGGCAACGT GATCCTCGAT GTGTACAATC TTAAGATCCT TAATCCAAAA 
GAATTAGAAA GTCAGATCAA TGAGATAGTC GGTGTAGTGA CTAACGGTCT GTTTGCCAAA 
CGCGGTGCGG ATGTGTTACT CGTTGGCACC CCTGATGGCG TAAAAACGTT TACTGCCAAA 
TAA
 
Protein sequence
MTQDEMKKAA GWAALKYVEE GSIVGVGTGS TVNHFIDALA TMKDDIEGAV SSSEASTQKM 
KALGIPVYDL NSVDRLSVYV DGADEINDRM DMIKGGGAAL TREKIVAAVA EKFICIVDNT 
KQVNILGEFP LPVEVIPMAR SYVARQLVKL GGDPVYREGV VTDNGNVILD VYNLKILNPK 
ELESQINEIV GVVTNGLFAK RGADVLLVGT PDGVKTFTAK