Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2927 |
Symbol | |
ID | 5078154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3394731 |
End bp | 3395069 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640500127 |
Product | SecC motif-containing protein |
Protein accession | YP_001184441 |
Protein GI | 146294017 |
COG category | [S] Function unknown |
COG ID | [COG3012] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.279406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGACA AATTTTTCTT TAAAGGTCGT AGAACGCCTA AGCCAAAGCA TGAAAGCTAT GGCTACAACA CTAAACGTGC CGCTAAACCG GGAACAGAGG CTTTTCCCCT GCAATTAATC GTTGCAGACG AAGCACGTAA ACTTGAAGTT GCCGCTATTG TTGCCGAGCA TCAACTGTTC GCTAATATTG AAGTCAATGC CGATGTTCCA GAAAACATTA TTGAATTAGA AGGTTTATTA AATAAACCTA AAACAACCAC CTTTGAAAAA AAGCCGAACC GTAATGAGCC ATGCGCCTGC GGTAGTGGTC AAAAATTTAA AAAATGTTGC GGTAAATAA
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Protein sequence | MSDKFFFKGR RTPKPKHESY GYNTKRAAKP GTEAFPLQLI VADEARKLEV AAIVAEHQLF ANIEVNADVP ENIIELEGLL NKPKTTTFEK KPNRNEPCAC GSGQKFKKCC GK
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