| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2922 |
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| Symbol | |
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| ID | 5078148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3388445 |
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| End bp | 3389920 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640500123 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001184438 |
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| Protein GI | 146294014 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAC AAAGACTATT AGTCAGCTGG ATTGGTGGAA AAGATCTAAG TATGCCAAAG
GGCCAGATAA CTGGTCCGAT TTGGGCAACA ATTGAAGCAG CTGAATTTGA TGTGATTGAA
CTCATTTATA ATTACAGTGA AGATGAAGTA AAACCTTATG TCGCTCTCCT GTCCGAACGG
GTGAATTGTG AAATTAATGC CCGTAAAGCA AATCTTTCAT CTCCAGTCGA TTACGAAGAA
ATTTACCTTG CTGCTGAGCA ATTATTGAAA GAGGTAGTAC AGCCCAACTC ATACTTAAGT
ATTTTGTTAA GCCCTGGCAC TCCTGCTATG CAAGCCATTT GGGTTTTGCT TGGTAAAACG
CGTTTCCCTT GTACTTTTTA TCAAGCTTCA AAAGAGCAGG GAATTGAAGC CGTAAATATC
CCTTTTAACG TCTCAGCTGA ATATGTCCCT GCTGTCACTC AACTCAATCA GTCCGAACTA
AGTAAACTCG CCCAATTAGA AGCTCCCATA GATTCAGCTT TCGATGACAT CATAACCATT
GGGACAGATA TTCAAACACT CAAGCAGCAA GCACAGATTT TGGCACAGCA GGAAATGCCA
GTGCTAATTT GTGGCGAGAG CGGCACAGGT AAAGAAATGT TTGCTAGAGC TATTCACAAT
GCCAGTACCG GCAAAGACAA ACCATTTATT GCAGTCAACT GCGGTGCTTT CCCCTCTGAG
CTAATCGACT CAATACTTTT TGGACACAAA CGTGGGGCAT TTACTGGGGC AGTATCTGAC
AAAGCTGGTG TATTTGAGCA AGCCCATAAA GGAACTTTGT TTTTAGATGA GTTTGGAGAG
TTGGAGCCTG CAGTGCAGGT AAGATTGCTT AGAGTGCTTC AGGATGGCAA GTATACCCGT
CTTGGAGATT CAGAAGAGCA AAGTAGCAAC TTTCGGCTAA TCACGGCAAC CAATAAAAAT
TTGATCTCCG AAGTTGCCTA TGGTCGTTTT CGTGAAGACT TGTTTTATCG CGTTGCAATA
GGCGTCTTAC AGTTACCCCC ATTAAGGTCT CGACAAGGTG ACTTAGACTT TTTGGTCGAC
TCACTACTGC AGACCTTGGC TAAAGAGCAT CCGATACTGC AAGGTAAAAA TATTTCCTAT
CTTGCAAAAA AAGTTATTAA AGAACACAAA TGGCCTGGCA ATATTCGGGA ATTAAAGGCG
ACGTTACTAC GCGCCGCATT ATGGGCCAGT TCAGATTGTA TTGATGAAGT TGAAATGCAA
AAAGCCTTGT TTACTATGGA AGATAAGCAA GATTCATTAT TAGACAGAGA GTTAGATCAA
GGTTTTGATA TAAAAGATAT TTTAGCTGAG GTTGAGCGCA GATACATTAT CAAAGCGCTC
GAACAAACTG ATGGAAACAA GAGTAAGGTC GCAAGGTTGC TTGGCTACAA TAATCACCAA
ACGTTAAGTA ATAAACTTAA AAAACTAGGG ATATAA
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| Protein sequence | MNKQRLLVSW IGGKDLSMPK GQITGPIWAT IEAAEFDVIE LIYNYSEDEV KPYVALLSER
VNCEINARKA NLSSPVDYEE IYLAAEQLLK EVVQPNSYLS ILLSPGTPAM QAIWVLLGKT
RFPCTFYQAS KEQGIEAVNI PFNVSAEYVP AVTQLNQSEL SKLAQLEAPI DSAFDDIITI
GTDIQTLKQQ AQILAQQEMP VLICGESGTG KEMFARAIHN ASTGKDKPFI AVNCGAFPSE
LIDSILFGHK RGAFTGAVSD KAGVFEQAHK GTLFLDEFGE LEPAVQVRLL RVLQDGKYTR
LGDSEEQSSN FRLITATNKN LISEVAYGRF REDLFYRVAI GVLQLPPLRS RQGDLDFLVD
SLLQTLAKEH PILQGKNISY LAKKVIKEHK WPGNIRELKA TLLRAALWAS SDCIDEVEMQ
KALFTMEDKQ DSLLDRELDQ GFDIKDILAE VERRYIIKAL EQTDGNKSKV ARLLGYNNHQ
TLSNKLKKLG I
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