Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2918 |
Symbol | |
ID | 5078144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3383654 |
End bp | 3384571 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640500119 |
Product | transposase, IS4 family protein |
Protein accession | YP_001184434 |
Protein GI | 146294010 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAAAT CCAAACGTAA AATACTTAAC TGGAAACAGT ACAACCAAGC ATTAGTCAAT CGAGGTTCGG TCACTTTTTG GCTGGATAAA TCAGCCATCA ATGCTTGGCA CTGCAAAGCC CATCACGGCG GTCGTGGTAG AGGTTTTCAA TTCAGTGATA CAGCGATTGA AACAGCCCTC ATGCTCAAAG GCGTATTTAA GTTGTCACTG CGAGCAACTG AAGGCTTCAT AAATTCTCTG TTTCGACTGA TGGATGTGCC ATTAGCGGCA CCGGATTACA CTTGTATAAG CAAACGGGCA AAGACTGTTG AGGTTAAGTA TCGTAACCCC TGTCGAGGCC CCGTTACTCA TCTTGTCGTC GATTCAACAG GATTGAAAGT TTACGGTGAA GGCGAATGGA AAACGCGCAA GCACGGTAAG GAGCGGCGAC GCACGTGGCG TAAGTTACAC CTCGCGATTG ACGCAGATAC TCACGATGTT GTATCAGCCG AAGTCAGCCT CGTTAATGTG GCTGATAACG AAGTATTACC GACAATGCTC AATCCGCTTC GTCGGAAGGT CAATCAAGTC TCAGCCGATG GTGCATACGA CACAAAAGAG TGCCACAAAT TGCTGCGACA CAAAGGTGCA AAACCAACTA TTCCGCCGCG TTCAAACGCA GGATATTGGG AAGATGGTCA CCCGCGAAAT GAAGCTGTTG AAGCATTGAA ATCTGGGACG TTAAAGCAAT GGAAAGACGA CAATGATTAC CATCAACGCT CGCTATCGGA GACAGCGATG TATCGTTATA AACAGCTCAT CAGTTCCAAG TTAAGCTTAC GTGATTACAA TGCACAGGTC GGGGAAGCTT TGGCTGGTGT AAAAGCGATG AACAAAGTCA TAGGGCTAGG TATGCCTGTT CGACAGACAA CTGCATAA
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Protein sequence | MGKSKRKILN WKQYNQALVN RGSVTFWLDK SAINAWHCKA HHGGRGRGFQ FSDTAIETAL MLKGVFKLSL RATEGFINSL FRLMDVPLAA PDYTCISKRA KTVEVKYRNP CRGPVTHLVV DSTGLKVYGE GEWKTRKHGK ERRRTWRKLH LAIDADTHDV VSAEVSLVNV ADNEVLPTML NPLRRKVNQV SADGAYDTKE CHKLLRHKGA KPTIPPRSNA GYWEDGHPRN EAVEALKSGT LKQWKDDNDY HQRSLSETAM YRYKQLISSK LSLRDYNAQV GEALAGVKAM NKVIGLGMPV RQTTA
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