Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2897 |
Symbol | |
ID | 5078644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3360109 |
End bp | 3361269 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640500098 |
Product | phage integrase family protein |
Protein accession | YP_001184413 |
Protein GI | 146293989 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAGTA TTAACTCTCG AAATAATAAG CTGTATCTCG ACTTTAGATT CAAGGGGATA CGTTGTAGAG AAATGACAAT GCTTGAAGAT ACAACAGCTA ATCGAAAAAG AGCAAGGGCA GTACTTACTC GAATTGAAGC GGAAATTCAG CTGAATCAAT TTGAGTATGC TCGTCATTTC CCTAACAGCA AGCAAGTTGA GAAGTTTCAA GCTTACGACC GAATGACTGC TTTAAGAGAT GCTTCTCGTA CTGTGCAAGT CTCAATATTT GTAGAGCAGT GGTTGCTTGA AAAGAAGGTG GAGTGGCGCC CATCGCAGCT AAGAACTATC GAGGATATCT TAACGTTATA CGTCTTACCT CGCTTTGGTG AGCGGGAAAT CAATTCGATC ACTAAGACTG ATATTCTTTC TTTTCGAGCG GATTTGGTCG ATGGACAAGC TTTTGCAAAG GAGCTTTCTG CGTCACGGAT AAATCAAATT CTGTCACCGC TTAGGGTAAT TCTTAATGAT GCTGCGGAGC GATATGAATT TGTTAGTCCC TGGAAGTCAA TAAAGCCTCT ACCAGTCAAT CGTAAGCCTG TGCATCCCTT CACATTAGAT GAGGTGCTTA AGTTTATCGA CTTTGTCAGA CCAGACTTTC GTTGCTATTT CTTGGTGCGC TTTTTCACGG GTTTACGTAC AGGAGAGATT GATGGATTAC AGTGGGAAAA CGTTGATTTT GAACGTCGTC AAATCCTAGT GCGTCAGTCT TGGGTTCGCA ATAAGTTGGG GCCAGTGAAA ACCAAAACGT CATTACGCGA AATTGATATG AATGACTTGG TTTATGACGC TTTATTTAAG CACTCTAAAT TATCAGATCG TAGTGGCTTT GTGTTCCAGA CTTCTGGCGG AAAACCTATG AACAATAAGA ATATGTCTTA TCGGGTTTGG TATCCGACAC TCGACATTTT AAGAATTTCA AGAAGAAATC CTTATCAAAC CAGGCATACG GCGGCAACGC TCTGGTTGGC ATCAGGGGAG TCTCCCGAGT GGATAGCGAA ACAAATGGGG CATGCCAATA CCAATATGTT GTTTACTGTC TACTCTCGGT ATGTGCCTAA TTTAACACGT AAAGATGGCA GTGCCTTTGA AGCATTTTTG AACCAAAAAC TAAGAGGATA A
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Protein sequence | MGSINSRNNK LYLDFRFKGI RCREMTMLED TTANRKRARA VLTRIEAEIQ LNQFEYARHF PNSKQVEKFQ AYDRMTALRD ASRTVQVSIF VEQWLLEKKV EWRPSQLRTI EDILTLYVLP RFGEREINSI TKTDILSFRA DLVDGQAFAK ELSASRINQI LSPLRVILND AAERYEFVSP WKSIKPLPVN RKPVHPFTLD EVLKFIDFVR PDFRCYFLVR FFTGLRTGEI DGLQWENVDF ERRQILVRQS WVRNKLGPVK TKTSLREIDM NDLVYDALFK HSKLSDRSGF VFQTSGGKPM NNKNMSYRVW YPTLDILRIS RRNPYQTRHT AATLWLASGE SPEWIAKQMG HANTNMLFTV YSRYVPNLTR KDGSAFEAFL NQKLRG
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