Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2883 |
Symbol | |
ID | 5078630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3344428 |
End bp | 3345048 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640500086 |
Product | ISSod8, transposase |
Protein accession | YP_001184401 |
Protein GI | 146293977 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGCTAA ACTTTTCTGG ACGCCATTTC CCAACAGATA TCATCATGCA AGCCCTACGA TATTACCTGG CCTATAAACT GAGTTACCGT GAAATTGAGG AGATGTTCGC TGAACGTAAT ATCCATTTTG ACCACTCAAC ACTGAACCGT TGGGTTATCA AATATGCGCC GCAACTCGAA GCCGTATTCA GGAAGAGAAA GCGTCGAGTA TCAGGGTCGT GGCGAATGGA CGAAACCTAC ATAAAGATTA AAGGTCGCTG GGTTTACTAT TATCGCGCCG TGGATAAATA CGGTGCTATT ATTGATTTTT ATTTGAGTGA GACCCGTGAT GAACCCGCTG CTCGGGCGTT TTTCAATAAA GCTATCAACC AACATGGCTT ACCTGAAAAG GTCGTCATTG ATCAAAGTGG GGCGAATGCT GCGGCATTAG ACACCATTAA TATTCGTCTT TGGCTGTCTG GTTGCATGTT GTTTATGATT GAGGTTTTAG CCATAAAATA TCTGAATAAT ATTGTTGAGC AAAGTCATCG AAAAGTGAAA GGTAAAATGA TCAATGTTTG GGTTGGAAGT CTTGGGAAGG TGCCGAATCA ACGCTTGCTG GCGTTGAACT TTGGTTCATG A
|
Protein sequence | MSLNFSGRHF PTDIIMQALR YYLAYKLSYR EIEEMFAERN IHFDHSTLNR WVIKYAPQLE AVFRKRKRRV SGSWRMDETY IKIKGRWVYY YRAVDKYGAI IDFYLSETRD EPAARAFFNK AINQHGLPEK VVIDQSGANA AALDTINIRL WLSGCMLFMI EVLAIKYLNN IVEQSHRKVK GKMINVWVGS LGKVPNQRLL ALNFGS
|
| |