Gene Sputcn32_2883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2883 
Symbol 
ID5078630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3344428 
End bp3345048 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content43% 
IMG OID640500086 
ProductISSod8, transposase 
Protein accessionYP_001184401 
Protein GI146293977 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTAA ACTTTTCTGG ACGCCATTTC CCAACAGATA TCATCATGCA AGCCCTACGA 
TATTACCTGG CCTATAAACT GAGTTACCGT GAAATTGAGG AGATGTTCGC TGAACGTAAT
ATCCATTTTG ACCACTCAAC ACTGAACCGT TGGGTTATCA AATATGCGCC GCAACTCGAA
GCCGTATTCA GGAAGAGAAA GCGTCGAGTA TCAGGGTCGT GGCGAATGGA CGAAACCTAC
ATAAAGATTA AAGGTCGCTG GGTTTACTAT TATCGCGCCG TGGATAAATA CGGTGCTATT
ATTGATTTTT ATTTGAGTGA GACCCGTGAT GAACCCGCTG CTCGGGCGTT TTTCAATAAA
GCTATCAACC AACATGGCTT ACCTGAAAAG GTCGTCATTG ATCAAAGTGG GGCGAATGCT
GCGGCATTAG ACACCATTAA TATTCGTCTT TGGCTGTCTG GTTGCATGTT GTTTATGATT
GAGGTTTTAG CCATAAAATA TCTGAATAAT ATTGTTGAGC AAAGTCATCG AAAAGTGAAA
GGTAAAATGA TCAATGTTTG GGTTGGAAGT CTTGGGAAGG TGCCGAATCA ACGCTTGCTG
GCGTTGAACT TTGGTTCATG A
 
Protein sequence
MSLNFSGRHF PTDIIMQALR YYLAYKLSYR EIEEMFAERN IHFDHSTLNR WVIKYAPQLE 
AVFRKRKRRV SGSWRMDETY IKIKGRWVYY YRAVDKYGAI IDFYLSETRD EPAARAFFNK
AINQHGLPEK VVIDQSGANA AALDTINIRL WLSGCMLFMI EVLAIKYLNN IVEQSHRKVK
GKMINVWVGS LGKVPNQRLL ALNFGS