Gene Sputcn32_2857 details

Gene Information

• Locus tag: Sputcn32_2857
• ID: 5078698
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 3319668
• End bp: 3320129
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640500060
• Product: putative metalloprotease
• Protein accession: YP_001184375
• Protein GI: 146293951
• COG category: [R] General function prediction only
• COG ID: [COG0319] Predicted metal-dependent hydrolase
• TIGRFAM ID: [TIGR00043] metalloprotein, YbeY/UPF0054 family

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.990205
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCTTG AGCTAGCATT AGATGTCCAA TATGCAACAA CAAGTGATTG GCTGCCCACA 
GAAGAGCAGC TTATGCTTTG GGCAAAAACA GCGATTGGCA ACGGTATGGA TAGGGCTGAA 
TTAACAATTC GCATTGTCGA TAGCCGTGAA AGCCAAATGC TAAACAGTAC TTACCGCGGC 
AAAGATAAAC CGACCAACGT ACTGTCATTC CCCTTTGAAG CACCAGCAGA AATTGAACTT 
CCTTTGCTTG GGGATCTTGT CATTTGCGCC GCAGTCGTTG AAAATGAAGC CCGTGAGCAA 
AATAAAACCC TAGAAGCCCA CTGGGCACAC ATGGTTGTAC ATGGTTGCTT GCATCTGCTA 
GGGTATGATC ACATTGAAGA TGAAGAAGCT GAAGAGATGG AGTCGTTGGA GACTCAACTC 
ATTGAAAGCT TAGGTTTTAC CAATCCATAC AAGGAACAAT AA 

 

Protein sequence

MSLELALDVQ YATTSDWLPT EEQLMLWAKT AIGNGMDRAE LTIRIVDSRE SQMLNSTYRG 
KDKPTNVLSF PFEAPAEIEL PLLGDLVICA AVVENEAREQ NKTLEAHWAH MVVHGCLHLL 
GYDHIEDEEA EEMESLETQL IESLGFTNPY KEQ