| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2853 |
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| Symbol | |
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| ID | 5078694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3314624 |
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| End bp | 3315211 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640500056 |
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| Product | peptidyl-tRNA hydrolase |
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| Protein accession | YP_001184371 |
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| Protein GI | 146293947 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
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| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000370002 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGAAA TAAAATTAAT AGTGGGCCTT GCTAATCCGG GGGCAGAATA TGCTCAGACC
CGCCATAATG CGGGCGCTTG GTATGTTCAA GAGTTAGCTC GAATTTGCGG CGTAACATTA
GTCCCTGACA GCAAATATTT TGGCTTAACC GCCAGAGCGG TACTACAGGG TAAAGATGTT
CGCTTGTTGA TCCCAACGAC GTATATGAAC TTAAGTGGTA AAGCCGTAGG TGCTTTGGCT
AATTTTTTTC GTATCACGCC TGAAGAAATT TTAGTCGCCC ACGATGAGCT TGATATGCCG
CCTGGCGTCG CTAAATTTAA GTTGGGTGGT GGCCATGGTG GCCACAATGG TTTAAAGGAT
ATTATTGCTA AATTGGCTAA CGATAAAAAT TTTTATCGTT TACGCATAGG TATTGGTCAC
CCCGGCGATA AAAACCAAGT CAGTGGTTAC GTACTCGGTA AAGCACCTGC GAAAGAGCAA
GAGCTTATTG AGGCCGCTAT TGATGAGGCG GTACGTTCCA CTGAAATTTT ATATAAAGAA
AACATGGTTA AAGCCATGAC CAGATTACAC TCCTTCAAAG CGGAGTAG
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| Protein sequence | MSEIKLIVGL ANPGAEYAQT RHNAGAWYVQ ELARICGVTL VPDSKYFGLT ARAVLQGKDV
RLLIPTTYMN LSGKAVGALA NFFRITPEEI LVAHDELDMP PGVAKFKLGG GHGGHNGLKD
IIAKLANDKN FYRLRIGIGH PGDKNQVSGY VLGKAPAKEQ ELIEAAIDEA VRSTEILYKE
NMVKAMTRLH SFKAE
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