| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2850 |
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| Symbol | |
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| ID | 5078684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3310461 |
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| End bp | 3311099 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640500046 |
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| Product | PepSY-associated TM helix domain-containing protein |
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| Protein accession | YP_001184368 |
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| Protein GI | 146293944 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3295] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000664158 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGGTTCA ATTCAATATG GTCTCTTTTA GAGAATGTGT CATTGAAATT AAAAGTCAGT
AAGTCATCGT TATCCTATGC CCGTATTATC CATGTTTATG TTTCTATGGC GTTATTATTG
CTGATGCTGT TTTTCGCGGT AACAGGAATA ACATTAAACC ATCCAAATTG GTTTTCAGGA
GCAGATCAGG AGCCTTTGCG TGAGCAAGTT GCAATTCCTA GTTATTTACT CCCTGTCGAT
GCGCAAGATC CACAGTGGCG TTTAGCCGCT GGGCATTGGC TAAAAAGTGA ATGGGCGATG
GATATCGCGA GCGCTGATAT CAGTGAAGAT GAAATTAGCC TCGTCAATAA AGGGCCTGGA
ACCTATCGCA GTGTGACACT GGATTTACTT GATGCAAAAG CCTATGTCGA AAGTATTGAT
TATGGTGTTG TGGCGGTACT CAATGATTTG CATAAGGGGC GAAACACCGG GACCGTTTGG
GCTTGGATAC TCGATCTGAG TGCAGTGCTC ATTATCTTAT TTTCGCTGAC GGGGGCTTAC
CTTTTGCTTC CACAAACAAA ACGTCTTAAA AAATCATTGC TATACATGGT GTTAGTCAGC
GGAAGCTGCG GACTTGTGTA TGTTTATTTT GTTCCATAA
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| Protein sequence | MRFNSIWSLL ENVSLKLKVS KSSLSYARII HVYVSMALLL LMLFFAVTGI TLNHPNWFSG
ADQEPLREQV AIPSYLLPVD AQDPQWRLAA GHWLKSEWAM DIASADISED EISLVNKGPG
TYRSVTLDLL DAKAYVESID YGVVAVLNDL HKGRNTGTVW AWILDLSAVL IILFSLTGAY
LLLPQTKRLK KSLLYMVLVS GSCGLVYVYF VP
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