Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2841 |
Symbol | |
ID | 5078675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3301362 |
End bp | 3303335 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640500037 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_001184359 |
Protein GI | 146293935 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000356985 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGTCTA GTAATTTGAG TGACATGGCA AAAAATCTAA TACTCTGGGT TGTCATCGCC GTTGTGCTGA TGTCAGTGTT TCAGGGTTAC TCCCCCTCTT CTTCGTCATC GCAGAAGATG GATTATTCTA CCTTCTTAGA CAATGTTCGT GATGGGCAGG TTGCTACGGT CGAGGTTAAG AGCGATCAAC GTACGATTGA AGGTGCTAAA CGGACTGGTG AAAAATTCAC TACTATCATG CCGTTATATG ACCAAGATTT AATTAATGAT CTTGATCGTA AAGGCATCAC TATGAAGGGG CAAGAAGCCG AAGAATCAGG GTTCTTAACC CAAATCTTCA TCTCTTGGTT CCCGATGTTA TTGCTTATCG GGGTATGGAT TTTCTTCATG CGCCAGATGC AAGGCGGCGG TGGCAAAGGC GCTATGTCCT TTGGTAAGAG CAAAGCCAAA CTGATGAGCG AAGATCAGAT TAAAACGACA TTTGCCGATG TTGCGGGTTG TGACGAGGCG AAAGAAGAAG TGAAAGAGCT GGTTGATTAC CTGCGCGATC CGACTAAATT CCAAAAGTTG GGCGGCCGTA TTCCAACGGG CGTGCTGATG GTGGGTCCTC CTGGTACAGG TAAAACCTTG CTGGCAAAAG CCATTGCGGG CGAATCTAAA GTACCTTTCT TCACTATCTC GGGTTCGGAT TTCGTTGAAA TGTTTGTTGG TGTCGGTGCA TCCCGTGTGC GTGACATGTT TGAACAAGCG AAAAAGTCTG CACCTTGTAT CATCTTCATC GATGAAATTG ATGCGGTCGG TCGTCAACGT GGTGCGGGTT TAGGTGGGGG GCACGATGAG CGTGAGCAAA CACTGAACCA AATGCTGGTT GAGATGGATG GCTTTGAAGG TAATGAAGGC GTTATCGTTA TCGCGGCGAC TAACCGTCCA GACGTACTCG ATTCTGCGCT ATTACGTCCG GGGCGTTTTG ACCGTCAAGT GGTCGTTGGC TTACCTGACG TTCGTGGCCG TGAGCAGATT TTGAAAGTGC ATATGCGTAA AGTTCCGCTT TCAGAAGATG TAAAGGCAAG CGTTATTGCC CGTGGTACAC CAGGTTTCTC GGGTGCTGAC TTAGCTAACT TAGTGAACGA AGCTGCCCTG TTTGCGGCTC GCGGAAATCG CCGAGTTGTA GGCATGGAAG AATTTGAGCG TGCAAAAGAT AAAATCATGA TGGGTGCTGA GCGCCGCTCT ATGGTGATGT CTGAAGCCGA AAAAGAAATG ACAGCTTACC ATGAAGCGGG TCATGCGATT GTGGGTTGTT TAGTGCCAGA GCACGATCCT GTGCACAAGG TGACTATCAT TCCTCGCGGC CGTGCATTGG GCGTGACTTT CTTCTTACCT GAAGCAGACT CAGTCAGTCA GAGTCGTCGC AAGTTAGAAA GCCAAATTTC AGTCGCTTAC GGTGGTCGTT TAGCAGAGGA ACTCATTTAC GGTAGCGACA AAGTGTCGAC TGGCGCATCA CAGGACATCA AATACGCGAC ATCTATTGCG CGTAACATGG TGACTCAGTG GGGCTTCTCG GACAAGCTAG GTCCATTGCT GTATGCCGAA GAGGACGGTG AAGTGTTCTT AGGCCGTAGT ATGGGTAAAG CCAAAGCCAT GTCCGATGAA ACGGCAACTA TTATCGATGC AGAAGTGAAA GTCTTTATCG ACAAAAACTA CGCCAGAGCG AGACAGATAT TGACGGATAA CCTCGATATT CTGCACTCAA TGAAAGAAGC CTTAATGAAG TATGAAACCA TTGATTCACT TCAAATTGAT GATTTGATGA ATCGTCGAGA AGTGCGTCAG CCTGCCGATT GGCAAGTGGA TGACAATGGT TCTAACGATA AAGGCAATGG TCATGGTGAA CCAGCTGCGA AAGCGGAAGA CAGTGTTATT GCAGCACCTG TTGAGCCAGA ACTGAAAGAT CCTGATGAAT CTCCAGCTAA ATAA
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Protein sequence | MRSSNLSDMA KNLILWVVIA VVLMSVFQGY SPSSSSSQKM DYSTFLDNVR DGQVATVEVK SDQRTIEGAK RTGEKFTTIM PLYDQDLIND LDRKGITMKG QEAEESGFLT QIFISWFPML LLIGVWIFFM RQMQGGGGKG AMSFGKSKAK LMSEDQIKTT FADVAGCDEA KEEVKELVDY LRDPTKFQKL GGRIPTGVLM VGPPGTGKTL LAKAIAGESK VPFFTISGSD FVEMFVGVGA SRVRDMFEQA KKSAPCIIFI DEIDAVGRQR GAGLGGGHDE REQTLNQMLV EMDGFEGNEG VIVIAATNRP DVLDSALLRP GRFDRQVVVG LPDVRGREQI LKVHMRKVPL SEDVKASVIA RGTPGFSGAD LANLVNEAAL FAARGNRRVV GMEEFERAKD KIMMGAERRS MVMSEAEKEM TAYHEAGHAI VGCLVPEHDP VHKVTIIPRG RALGVTFFLP EADSVSQSRR KLESQISVAY GGRLAEELIY GSDKVSTGAS QDIKYATSIA RNMVTQWGFS DKLGPLLYAE EDGEVFLGRS MGKAKAMSDE TATIIDAEVK VFIDKNYARA RQILTDNLDI LHSMKEALMK YETIDSLQID DLMNRREVRQ PADWQVDDNG SNDKGNGHGE PAAKAEDSVI AAPVEPELKD PDESPAK
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