| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2838 |
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| Symbol | |
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| ID | 5078672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3297922 |
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| End bp | 3298704 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640500034 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_001184356 |
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| Protein GI | 146293932 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000084878 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACTCA GACGTCCTAT GGTAGCTGGC AATTGGAAGA TGAACGGCAG TGCAGCATTA
GCACAAGAGT TGTTCAAAAA ATTTGCCTCT AAGCTCCAAA ATGATTCAGC TGAAGTGGTT
TTATGCCCGC CTTCTATCTA TCTAGAGAGC GTTAGGCAAC TGCTAGAAGC AAACAAGGAA
GCGTTAGACG GTTCACTTGT TAGGATGGGC GCACAAAACC TAAGTCAACA CGACTTTGGC
GCTTATACCG GAGAAGTTTC AGGTCAGATG CTAAAAGATT CAGGATGTCG ATATGTGATT
ATCGGACATT CAGAACGTCG CCGTATGTAC GGAGAGACGA GTAATATTGT AGCGGAGAAA
TTCGCCGCTG CACAAAAGCA CGGCTTAACC CCAATATTGT GTGTGGGAGA GTCAGGTCCA
GCGCGTGAAG CAAGACGTAC CTTCGAGGTA ATTGCGGAAG AGTTGGATAT AGTGATCCAG
AAAAATGGCA CTATGGCTTT TGATAACGCC ATTATCGCCT ACGAGCCACT ATGGGCTGTA
GGGACAGGTA AAAGCGCTAC ACCAGAGCAG GCACAAGAAG TTCATGCGTT TATTCGCAAA
CGTCTCTCTG AGGTATCTCC ATTTATCGGA GAAAATATCA GGATTCTCTA CGGTGGTAGT
GTGACGCCGA GTAATGCTGC AGATTTATTT GCCCAACCTG ATGTTGATGG TGGACTGATT
GGCGGTGCTA GCTTAAACTC TAGCGAGTTT TTAAGTCTGT GTACCATAGC GATGAGCGCA
TAA
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| Protein sequence | MALRRPMVAG NWKMNGSAAL AQELFKKFAS KLQNDSAEVV LCPPSIYLES VRQLLEANKE
ALDGSLVRMG AQNLSQHDFG AYTGEVSGQM LKDSGCRYVI IGHSERRRMY GETSNIVAEK
FAAAQKHGLT PILCVGESGP AREARRTFEV IAEELDIVIQ KNGTMAFDNA IIAYEPLWAV
GTGKSATPEQ AQEVHAFIRK RLSEVSPFIG ENIRILYGGS VTPSNAADLF AQPDVDGGLI
GGASLNSSEF LSLCTIAMSA
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