| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2832 |
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| Symbol | truB |
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| ID | 5078664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3291032 |
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| End bp | 3291988 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640500026 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001184350 |
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| Protein GI | 146293926 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.478015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGTC GTCCGAAAGG CCGTTTTATC GATGGGATAG TGTTACTGGA TAAATCCACT
GGCATGAGTT CTAACTTTGC CTTGCAAAGG GTAAAGCGCT TTTTTAATGC GAATAAAGCC
GGGCATACGG GTGCACTCGA TCCGTTAGCG ACAGGTATGT TACCAGTGTG CCTAGGTGAA
GCGACTAAGT TTTCCCAGCA CTTATTAGAT GCTGATAAAC GTTACTTAGT GACAGCAAAA
CTGGGCGAGC GTACCGATAC CAGTGATTCA GATGGTGAAG TGGTTCAGAC GCGCCCAGTT
ACATTTACTG AGGCGCAACT ACTGAGTGCG CTTGAGCACT TTCGTGGTGA CACTCAGCAA
GTGCCTTCTA TGTATTCCGC GCTGAAATAT CAGGGGCAGC CTCTGTATAA ATATGCGCGT
GAAGGCATAG AAGTGCCGCG AGAATCTCGC CCTATTACGG TATTTGAGCT TAATTTCATC
AGTCTTGAAG GTGATGAGTT GACCTTAGAC ATTCATTGCT CTAAAGGGAC TTATATTCGC
ACCATCATTG ATGATCTTGG TGAAATGTTA GGTTGTGGCG CCCATGTGAT TATGTTGCGA
CGAACTCAAG TTGCACAGTA TCCCTATGCC AAAATGGTTA CACTAGAACA GCTCGAAGCA
CTTGTCACCC AAGCACATGA ACAACAGATA GATCCGAGTG TATTACTCGA TCCTCTCTTA
TTACCCATGG ATACGGCAGT GGCTGACTTT CCTGAGGTCA ATGTGCCTGA AGCGAGTGCG
GCTTATTTGA TGCAAGGCCA AGCGGTACGT GTGACAGGTC TAAAAGCTGA CACATTAGTG
CGTATCACCT TAGGGGATGC GCATCGATTC GTTGGTATTG GTGCAATGAA TGATGATGGC
CTTTTGGCGC CGAAACGGCT CATAGTGATC CATGACGAGC CGATAGTCAC AGATTAA
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| Protein sequence | MARRPKGRFI DGIVLLDKST GMSSNFALQR VKRFFNANKA GHTGALDPLA TGMLPVCLGE
ATKFSQHLLD ADKRYLVTAK LGERTDTSDS DGEVVQTRPV TFTEAQLLSA LEHFRGDTQQ
VPSMYSALKY QGQPLYKYAR EGIEVPRESR PITVFELNFI SLEGDELTLD IHCSKGTYIR
TIIDDLGEML GCGAHVIMLR RTQVAQYPYA KMVTLEQLEA LVTQAHEQQI DPSVLLDPLL
LPMDTAVADF PEVNVPEASA AYLMQGQAVR VTGLKADTLV RITLGDAHRF VGIGAMNDDG
LLAPKRLIVI HDEPIVTD
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