Gene Sputcn32_2824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2824 
Symbol 
ID5080797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3280959 
End bp3282218 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content45% 
IMG OID640500018 
Productnucleoside transporter 
Protein accessionYP_001184342 
Protein GI146293918 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1972] Nucleoside permease 
TIGRFAM ID[TIGR00804] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000097854 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAT TGATGAGTTT AGTAGGGGTG GTCACCCTAC TTGCGATAGG TTTCCTCCTA 
TCGAATAACA AAAAAGCAAT TAATTTACGT ACAGTGGGTG GTGCGTTAGC CATTCAAGCC
GCCTTCGGTG GTTTTGTTCT GTATGTTCCC GTAGGTAAAG ATATTCTGAA AAGTGTATCT
GACGCCGTAT CTAGCGTTAT TGGTTATGCA CAAAACGGTA TTAGCTTCCT GTTTGGCGAT
TTAGCTAACT TCAAACTTGG TTTTATTTTC GCTGTTAACG TGTTGCCTGT TATCGTGTTC
TTCTCTTCTT TAATCGCGGT ACTGTACTAC CTAGGTGTAA TGCAGTGGGT CATCCGTATC
ATCGGTGGCG CGCTACAAAA AGCATTAGGT ACAAGCCGTA CTGAGTCTAT GTCAGCAACT
GCTAACATTT TCGTTGGTCA AACTGAAGCG CCTTTAGTGG TTCGTCCGTT TATTCCTACG
ATGACGCAGT CTGAACTGTT TGCGATCATG GTGGGTGGTT TAGCATCAAT CGCGGGTTCA
GTGTTAGCTG GTTACGCGCA AATGGGCGTG CCTATCGAAT ACTTAGTTGC CGCTTCATTC
ATGGCAGCAC CAGGTGGCCT ATTAATGGCG AAACTGATGC ACCCAGAAAC AGAAGCCGCT
AAGAACGATA TGGATGAATT ACCAGAAGAT CCTGATAAGC CAGCGAACGT GTTAGACGCT
GCGGCTGCGG GTGCTTCATC TGGTATGCAT TTAGCGCTGA ACGTTGGTGC TATGTTGTTA
GCCTTCGTAG GTTTGATCGC GATGATCAAC GGTATCATCG GTGGTGTAGG CGGTTGGTTT
GGTGTTGAAG GTTTAACACT TGAGCTGATC CTTGGCTACA TTTTCATGCC ATTAGCATTC
TTAATTGGTG TGCCTTGGAA CGAAGCGTTA GTAGCAGGTT CTTTCATCGG TCAAAAGATC
GTTGTTAACG AATTCGTCGC TTACTTAAAC TTTGCTCCAT ACTTAAAAGA CATCGCTGAT
GGTGGCCTAG TTGTGGCTGA AACTGGTTTA GCAATGACTG ACAGAACCAA AGCGATTATT
TCGTTTGCAC TGTGTGGTTT CGCTAACTTG TCTTCAATTG CGATTCTACT GGGTGGTTTA
GGCGCTATGG CTCCTAACCG TCGCCATGAT TTAGCTAAAA TGGGTATTCG TGCGGTTATC
GCCGGCTCTT TAGCTAACTT AATGAGCGCA ACACTTGCTG GCTTATTCTT AGCTATCTAA
 
Protein sequence
MNILMSLVGV VTLLAIGFLL SNNKKAINLR TVGGALAIQA AFGGFVLYVP VGKDILKSVS 
DAVSSVIGYA QNGISFLFGD LANFKLGFIF AVNVLPVIVF FSSLIAVLYY LGVMQWVIRI
IGGALQKALG TSRTESMSAT ANIFVGQTEA PLVVRPFIPT MTQSELFAIM VGGLASIAGS
VLAGYAQMGV PIEYLVAASF MAAPGGLLMA KLMHPETEAA KNDMDELPED PDKPANVLDA
AAAGASSGMH LALNVGAMLL AFVGLIAMIN GIIGGVGGWF GVEGLTLELI LGYIFMPLAF
LIGVPWNEAL VAGSFIGQKI VVNEFVAYLN FAPYLKDIAD GGLVVAETGL AMTDRTKAII
SFALCGFANL SSIAILLGGL GAMAPNRRHD LAKMGIRAVI AGSLANLMSA TLAGLFLAI