| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2824 |
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| Symbol | |
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| ID | 5080797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3280959 |
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| End bp | 3282218 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640500018 |
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| Product | nucleoside transporter |
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| Protein accession | YP_001184342 |
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| Protein GI | 146293918 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000097854 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAT TGATGAGTTT AGTAGGGGTG GTCACCCTAC TTGCGATAGG TTTCCTCCTA
TCGAATAACA AAAAAGCAAT TAATTTACGT ACAGTGGGTG GTGCGTTAGC CATTCAAGCC
GCCTTCGGTG GTTTTGTTCT GTATGTTCCC GTAGGTAAAG ATATTCTGAA AAGTGTATCT
GACGCCGTAT CTAGCGTTAT TGGTTATGCA CAAAACGGTA TTAGCTTCCT GTTTGGCGAT
TTAGCTAACT TCAAACTTGG TTTTATTTTC GCTGTTAACG TGTTGCCTGT TATCGTGTTC
TTCTCTTCTT TAATCGCGGT ACTGTACTAC CTAGGTGTAA TGCAGTGGGT CATCCGTATC
ATCGGTGGCG CGCTACAAAA AGCATTAGGT ACAAGCCGTA CTGAGTCTAT GTCAGCAACT
GCTAACATTT TCGTTGGTCA AACTGAAGCG CCTTTAGTGG TTCGTCCGTT TATTCCTACG
ATGACGCAGT CTGAACTGTT TGCGATCATG GTGGGTGGTT TAGCATCAAT CGCGGGTTCA
GTGTTAGCTG GTTACGCGCA AATGGGCGTG CCTATCGAAT ACTTAGTTGC CGCTTCATTC
ATGGCAGCAC CAGGTGGCCT ATTAATGGCG AAACTGATGC ACCCAGAAAC AGAAGCCGCT
AAGAACGATA TGGATGAATT ACCAGAAGAT CCTGATAAGC CAGCGAACGT GTTAGACGCT
GCGGCTGCGG GTGCTTCATC TGGTATGCAT TTAGCGCTGA ACGTTGGTGC TATGTTGTTA
GCCTTCGTAG GTTTGATCGC GATGATCAAC GGTATCATCG GTGGTGTAGG CGGTTGGTTT
GGTGTTGAAG GTTTAACACT TGAGCTGATC CTTGGCTACA TTTTCATGCC ATTAGCATTC
TTAATTGGTG TGCCTTGGAA CGAAGCGTTA GTAGCAGGTT CTTTCATCGG TCAAAAGATC
GTTGTTAACG AATTCGTCGC TTACTTAAAC TTTGCTCCAT ACTTAAAAGA CATCGCTGAT
GGTGGCCTAG TTGTGGCTGA AACTGGTTTA GCAATGACTG ACAGAACCAA AGCGATTATT
TCGTTTGCAC TGTGTGGTTT CGCTAACTTG TCTTCAATTG CGATTCTACT GGGTGGTTTA
GGCGCTATGG CTCCTAACCG TCGCCATGAT TTAGCTAAAA TGGGTATTCG TGCGGTTATC
GCCGGCTCTT TAGCTAACTT AATGAGCGCA ACACTTGCTG GCTTATTCTT AGCTATCTAA
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| Protein sequence | MNILMSLVGV VTLLAIGFLL SNNKKAINLR TVGGALAIQA AFGGFVLYVP VGKDILKSVS
DAVSSVIGYA QNGISFLFGD LANFKLGFIF AVNVLPVIVF FSSLIAVLYY LGVMQWVIRI
IGGALQKALG TSRTESMSAT ANIFVGQTEA PLVVRPFIPT MTQSELFAIM VGGLASIAGS
VLAGYAQMGV PIEYLVAASF MAAPGGLLMA KLMHPETEAA KNDMDELPED PDKPANVLDA
AAAGASSGMH LALNVGAMLL AFVGLIAMIN GIIGGVGGWF GVEGLTLELI LGYIFMPLAF
LIGVPWNEAL VAGSFIGQKI VVNEFVAYLN FAPYLKDIAD GGLVVAETGL AMTDRTKAII
SFALCGFANL SSIAILLGGL GAMAPNRRHD LAKMGIRAVI AGSLANLMSA TLAGLFLAI
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