Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2814 |
Symbol | |
ID | 5080787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3267749 |
End bp | 3269113 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640500008 |
Product | DNA repair protein RadA |
Protein accession | YP_001184332 |
Protein GI | 146293908 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGA ATAAAACTGC GTACGTGTGT AATGAGTGTG GGCAAGACTT TCCTCGTTGG CAAGGCCAAT GTAGCGCCTG CCAAGAATGG AATACGATTA CCGAAGTTAG ACTCGGTGCT GCTTCGCCTG GGCGAGGGAC TAAGTTTGCA GGTTATGCAG GGGCAAGTAG TAGTGAAGTC AAAACCTTAG ATCAAATCGA TTTGAATGCG TTACCGCGAA TTTTGAGTCA CTTTGGAGAA CTCGACCGAG TGCTGGGGGG CGGGATTGTC CCGGGTTCAG CGATTCTTAT CGGTGGTCAC CCTGGAGCCG GTAAAAGTAC CCTGTTGTTG CAAACGCTCT GTTATTTGGC TGAACAAATG CCGGCATTAT ACGTAACGGG TGAAGAGTCT TTACAGCAGG TTGCCATGCG CGCCCATCGT TTGGGTTTAC CAACCAATAA ATTACGGATG TTATCGGAAA CCAGTGTCGA GCAAATTTGT GAAGTTGCCC TAAAAGAATT ACCTAAGGTG ATTGTGGTTG ATTCGATTCA GGTCATGCAT ATGAGTGATG TGGCATCAAG TCCTGGCAGT GTGTCGCAGG TACGAGAGTC TGCTTCTTAT TTGACGCGTT TTGCGAAACA AAATGGTATA GCCGTGATTA TGGTGGGTCA TGTCACTAAG GACGGTAGCC TTGCAGGCCC TAAGGTGCTT GAGCATTGTA TTGATTGTTC AGTGATGTTT GAGGGGGATA GTGACAGTCG TTACCGTACC TTGCGTTCCC ACAAAAACCG TTTCGGTGCA ATCAATGAGT TAGGTGTATT TGCCATGACA GAGCGCGGCT TAAAAGAAGT CGCTAATCCT TCAGCTATCT TCCTTTCCCG TGGTGAAGAG GAATCGTCTG GTTCTTTAGT GATGGTGGTG TGGGAAGGTA CACGACCGCT GTTAGTAGAA CTGCAAGTGC TGGTGGATAA CTCGGCTATG TCTAATCCGC GCCGCGTGGC TGTTGGGATG GATGCAAACC GTTTAGCCAT GTTACTGGCG GTTATGCATC GCCATGGCGG TTTGCAAATG TCGGATCAGG ATGTGTTTGT TAACGTAGTC GGTGGCGTTA AAGTGACGGA AACCAGTGCG GACTTAACCC TATTACTGGC AATGGTATCG AGTTTTCGTG GCGAGATTTT ACCCAGTGAT TTGGTCGCAT TTGGTGAAGT CGGGTTATCG GGCGAAATTC GGCCAGTGCC AAATGGACAA GAGCGATTAA TCGAAGCGGC TAAACATGGT TTTAAACGAG CGATAGTCCC TAAGGCTAAT GTGCCTAAAA AACCTCCTAT AGGGATGGAA GTTATCGGTG TTTCAAAACT ATCAGAAGCC TTAGAGGCGA TTTAG
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Protein sequence | MAKNKTAYVC NECGQDFPRW QGQCSACQEW NTITEVRLGA ASPGRGTKFA GYAGASSSEV KTLDQIDLNA LPRILSHFGE LDRVLGGGIV PGSAILIGGH PGAGKSTLLL QTLCYLAEQM PALYVTGEES LQQVAMRAHR LGLPTNKLRM LSETSVEQIC EVALKELPKV IVVDSIQVMH MSDVASSPGS VSQVRESASY LTRFAKQNGI AVIMVGHVTK DGSLAGPKVL EHCIDCSVMF EGDSDSRYRT LRSHKNRFGA INELGVFAMT ERGLKEVANP SAIFLSRGEE ESSGSLVMVV WEGTRPLLVE LQVLVDNSAM SNPRRVAVGM DANRLAMLLA VMHRHGGLQM SDQDVFVNVV GGVKVTETSA DLTLLLAMVS SFRGEILPSD LVAFGEVGLS GEIRPVPNGQ ERLIEAAKHG FKRAIVPKAN VPKKPPIGME VIGVSKLSEA LEAI
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