Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2801 |
Symbol | |
ID | 5080774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3252922 |
End bp | 3253764 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640499995 |
Product | putative signal transduction protein |
Protein accession | YP_001184319 |
Protein GI | 146293895 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTACTG AACATCTACT GTTAGTCGGA CTATTAAAAA AACTAAAAGA GGATGCCCTC GTGTTACCTA CCTTGCCAGA AGTGGCAATG CGGGTGCAGG AAGTTGTCGG GCGCCCAGAT GCAAGCCTTA AACAAGTGGC TGAAGTGATA GGCCAGGATG CGGCGATTTC AGCTCGTATT ATCAAAGTGG CCAATAGTGC TTTATACAGC CGTGGTGTTC CCGCAGAAAG TATTAGTGGC GCGGTTTCCC GAATTGGGTT AATTCAGATC AAAAGTATTG CGACTTCTGT GGCGATGGAG CAACTCTTTA TCTCCACCAA TGAAATGGTG TGGGAAGTGA TGGATGAAGT GTGGCGTACT TCGATTGATG TTACTGCCGC AGCTTGCGCT ATATTGCACA TGTACAATAA AAGTAAACCC AATAGTGGGC TTAACTTTGA CACTCTAACC TTGGCGGGAT TAGTCCATAA TATTGGTGCT TTACCCGTGC TTACCGAGGC TGAGACACAT CCAGAGTTGT TTGCCAGCAT CGAACAATTA AGATCTTTAG TGCGAAAAAT GCAGGGCCCG CTTGGGCGCG CAGTATTAAA AAGTTGGGAC TTTGCACCTG ACGTTATGGC CGTAGTTGAA CGTTGGGCCG ATTTGCCTTA TCTACCAGAA CATGTCACTT ACTTAGATTT TATCCGTGCA GCCGCTTTTT ATACTGGTGA ATTACGTGCA GGTACCGAGC TTGAACAGCG CCTTGATGTG TTTGTTGCTA GGGGATTACC TGTGACTGCG GATGCGTTAG CCAGTGATGA GTTTATGGAA AAATTCCATT CAATTAGAGA AAGTTACCAA TAG
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Protein sequence | MSTEHLLLVG LLKKLKEDAL VLPTLPEVAM RVQEVVGRPD ASLKQVAEVI GQDAAISARI IKVANSALYS RGVPAESISG AVSRIGLIQI KSIATSVAME QLFISTNEMV WEVMDEVWRT SIDVTAAACA ILHMYNKSKP NSGLNFDTLT LAGLVHNIGA LPVLTEAETH PELFASIEQL RSLVRKMQGP LGRAVLKSWD FAPDVMAVVE RWADLPYLPE HVTYLDFIRA AAFYTGELRA GTELEQRLDV FVARGLPVTA DALASDEFME KFHSIRESYQ
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