Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2793 |
Symbol | |
ID | 5080766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3245048 |
End bp | 3245692 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640499987 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001184311 |
Protein GI | 146293887 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTCAA CCGTCACCCA GACGCCCTGT GTAGGTCGCC CACGAGCTTT TGACACTGAA GATGCATTAG CTAAAGCCTT AGAAGTCTTC TGGCGCAAAG GCTTTGAAGG TACATCGTTA ACCGATCTCA CCCAAGCGAT GGGCATAAAT AAACCTAGTC TTTATGCCGC CTTCGGCAAT AAAGAACAGT TATTTCTCAA AGCAATAGAG TTATATGAAC AGCGTCCCTG TGCATTTTTC TATCCTGCAC TGGAAAAAGA GACCGCCTAT CTGGTCGTCG AGTCCATGCT ACTCGGTGCC GCTGATTCTT TGGTGGATAA AAGCCATCCT CAGGGATGTT TGATTGTCCA AGGCGCTCTC ACCTGTAGTG AAGCAGGGCA AGCTATCAAG GATACGTTAA TTAACCGACG CCGCGACGGT GAAATCGCCC TGTGCGAACG GCTGCAACGC GCCAAAGATG AAGGGGATTT ACCCGCGGAT GCTGATCCGC TCTTGCTTGC ACGTTACATA GGCACGGTAT TACAAGGCAT GGCCGTGCAA GCGACCAATG GAATTTGCCC AAATGAACTG CGTCAAGTAG CAGAGTTGAC ACTCGCTAAC TTTCCACGGA ATCACATCAA TCATAATGAT AAAGACGCTA CTTGA
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Protein sequence | MMSTVTQTPC VGRPRAFDTE DALAKALEVF WRKGFEGTSL TDLTQAMGIN KPSLYAAFGN KEQLFLKAIE LYEQRPCAFF YPALEKETAY LVVESMLLGA ADSLVDKSHP QGCLIVQGAL TCSEAGQAIK DTLINRRRDG EIALCERLQR AKDEGDLPAD ADPLLLARYI GTVLQGMAVQ ATNGICPNEL RQVAELTLAN FPRNHINHND KDAT
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