Gene Sputcn32_2793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2793 
Symbol 
ID5080766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp3245048 
End bp3245692 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content49% 
IMG OID640499987 
ProductTetR family transcriptional regulator 
Protein accessionYP_001184311 
Protein GI146293887 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTCAA CCGTCACCCA GACGCCCTGT GTAGGTCGCC CACGAGCTTT TGACACTGAA 
GATGCATTAG CTAAAGCCTT AGAAGTCTTC TGGCGCAAAG GCTTTGAAGG TACATCGTTA 
ACCGATCTCA CCCAAGCGAT GGGCATAAAT AAACCTAGTC TTTATGCCGC CTTCGGCAAT 
AAAGAACAGT TATTTCTCAA AGCAATAGAG TTATATGAAC AGCGTCCCTG TGCATTTTTC 
TATCCTGCAC TGGAAAAAGA GACCGCCTAT CTGGTCGTCG AGTCCATGCT ACTCGGTGCC 
GCTGATTCTT TGGTGGATAA AAGCCATCCT CAGGGATGTT TGATTGTCCA AGGCGCTCTC 
ACCTGTAGTG AAGCAGGGCA AGCTATCAAG GATACGTTAA TTAACCGACG CCGCGACGGT 
GAAATCGCCC TGTGCGAACG GCTGCAACGC GCCAAAGATG AAGGGGATTT ACCCGCGGAT 
GCTGATCCGC TCTTGCTTGC ACGTTACATA GGCACGGTAT TACAAGGCAT GGCCGTGCAA 
GCGACCAATG GAATTTGCCC AAATGAACTG CGTCAAGTAG CAGAGTTGAC ACTCGCTAAC 
TTTCCACGGA ATCACATCAA TCATAATGAT AAAGACGCTA CTTGA
 
Protein sequence
MMSTVTQTPC VGRPRAFDTE DALAKALEVF WRKGFEGTSL TDLTQAMGIN KPSLYAAFGN 
KEQLFLKAIE LYEQRPCAFF YPALEKETAY LVVESMLLGA ADSLVDKSHP QGCLIVQGAL 
TCSEAGQAIK DTLINRRRDG EIALCERLQR AKDEGDLPAD ADPLLLARYI GTVLQGMAVQ 
ATNGICPNEL RQVAELTLAN FPRNHINHND KDAT