| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2782 |
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| Symbol | |
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| ID | 5080755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3229273 |
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| End bp | 3230235 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640499976 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001184300 |
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| Protein GI | 146293876 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0196765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAGAC TCGAAGCGGC TAAGGTGTTT GTGACTATTG TTGAGCGCGG CAGCATGATC
AGCGCCGCTA ATGCTTTAGA CATGTCACGC TCTATGGTGA CCCGTTATTT GAGCGAAATG
GAAGACTGGT CTGGTGCTAG GTTGTTGCAT CGCTCGACGC GTAGCCTCAG TTTAACGCCT
GCGGGTGAGC AAGTGCTCGA TTATTGCCAT CGGCTGCTCG AACTGGCTAA CGAAGTACCA
GCGGTCAGTC ATGCAGGTGT GACGATCCCG CGGGGATTGC TTCGCATTAG CTGCTCACAA
TTTATGGCAC ATCAGATTTT AGCGCCTGTA GTGCGCCAAT ATTTAGCCAG TTATCCGCAG
GCGAGCGTGA ATTTCCACGT GAGCAGCCAA ACCGTCGATC TGGTTGCTGA GCGAATTGAT
TTGGCTATTC GTATCACTAA TGAGCTTGAC CCTAATCTTA TCGCTAGGCG CTTGGGTGAA
TGTGAGTCTG TGGTGTGCGC CGCACCGAGT TATCTTGCCG CGCGCGCCGC CGTGCTGCAT
CCCGAAGATT TGACCCAGCA TAACTGCTTA ACCTATTCCT ATTTTGGCGA TGTGATGTGG
CGCTTTTATC AAACCGATGT AGGGGCGAAA CAGGCTCAGG CGCTGAACCC CGAGTCTAAG
TTAAACCAAG GGCAGGCGTT TAATGTGCCA GTGGATGGTA ATTTTAGCGC CAATGATTCC
ATGGTGGTGC TTAATGCCAC GCTGGCGGGC GAGGGGATTG CGATGCAACC GCTATGGGCG
GCGAAACCCT ATTTAGACTC GGGTCAGTTA GTGCCTTTAT TAACTGAGTT TAAACCTCAG
TCCCTCGGTG TGTATGGCGT GTATCAATCC CGCAAACACA TGCAACCTGC ACTTAGGGTG
ATGATGGATA TGCTGGTGGC CTACTTTGCC AGCTTGAATT TAAATAGTGC CAGTTTGAAA
TAG
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| Protein sequence | MDRLEAAKVF VTIVERGSMI SAANALDMSR SMVTRYLSEM EDWSGARLLH RSTRSLSLTP
AGEQVLDYCH RLLELANEVP AVSHAGVTIP RGLLRISCSQ FMAHQILAPV VRQYLASYPQ
ASVNFHVSSQ TVDLVAERID LAIRITNELD PNLIARRLGE CESVVCAAPS YLAARAAVLH
PEDLTQHNCL TYSYFGDVMW RFYQTDVGAK QAQALNPESK LNQGQAFNVP VDGNFSANDS
MVVLNATLAG EGIAMQPLWA AKPYLDSGQL VPLLTEFKPQ SLGVYGVYQS RKHMQPALRV
MMDMLVAYFA SLNLNSASLK
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