Gene Sputcn32_2777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2777 
Symbol 
ID5080750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp3223432 
End bp3224088 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content51% 
IMG OID640499971 
Productriboflavin synthase subunit alpha 
Protein accessionYP_001184295 
Protein GI146293871 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0829317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACAG GGATTATTGA AGCCGTTGGC ACCCTTCGCA AACTGGAGCG TAAAGGCGAT 
GATATTCGTC TTACCGTGGC GAGCGGCAAA CTGGATTTAA CCGATGTGCG TTTAGGCGAC 
AGTATTGCCA CCAATGGCGT ATGCTTAACG GTTGTGCAGC AACTAGCCGA CGGTTATGTG 
GCTGATGTTT CAGCCGAAAC AGTGAGTCTA ACCGGGTTTG CCAACTATAA AGTGGGCACT 
AAGGTGAATC TTGAAAAGGC CGTTACTCCC ACCACGCGTT TAGGTGGCCA TATGGTCAGC 
GGCCATGTGG ACGGTATTGC AACGGTTGAG CAACGCTTAG TGCGTGGGCA AGCCATCGAG 
TTTTGGTTAG CCGCACCCGC AGAGCTTGGG CGTTACATAG CCCACAAAGG TTCCATTACC 
ATTGACGGCG TGAGTCTGAC GGTGAACGAA GTGGATGGCA GTCGATTCCG CTTGACCATA 
GTTCCCCATA CCGCAGGTGA AACCACCTTA ATCGACCTGC AAGCGGGCGA TAAGGTGAAT 
ATCGAAGTAG ATTTAATCGC CCGTTATCTT GAACGCTTAA TGAATTATGA TGGCAAAGAC 
AGCAAGAGCG GTGGCGTCAC CATGGAAATG TTAGCCCGTG CCGGGTTTGT GCGTTAG
 
Protein sequence
MFTGIIEAVG TLRKLERKGD DIRLTVASGK LDLTDVRLGD SIATNGVCLT VVQQLADGYV 
ADVSAETVSL TGFANYKVGT KVNLEKAVTP TTRLGGHMVS GHVDGIATVE QRLVRGQAIE 
FWLAAPAELG RYIAHKGSIT IDGVSLTVNE VDGSRFRLTI VPHTAGETTL IDLQAGDKVN 
IEVDLIARYL ERLMNYDGKD SKSGGVTMEM LARAGFVR