Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2774 |
Symbol | nusB |
ID | 5080841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3221236 |
End bp | 3221640 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640499968 |
Product | transcription antitermination protein NusB |
Protein accession | YP_001184292 |
Protein GI | 146293868 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000145309 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCTT CTGAGCGCCG CAAGGCCCGC CGTTTAGCCG TTCAAGCCAT CTATTCATGG CAACTAAGCG GGAATAATAT TGCCGATGTC GAGCATGAGT TTTTAACTGA GCAGAGTCTC GACGGTGTTG ATGTAGCTTA TTTTCGTGAG CTATTTTCAG GCGTTGCAAC GAAGAAAACC CAGTTGGATG AGCTGATCAT CCCGCATCTG GAGCGCCCGA TCGATGAAGT GTCTCCTGTT GAGAAAGCCA TAGTACGTTT AGCGACCTAT GAGCTGACTT TCCGTAAAGA TGTGCCCTAC AAGGTCGCGA TTAACGAGGC GATTGAGTTG GCAAAAGCTT TCGGTGCGGA CGAGAGTCAT AAGTTTGTGA ACGGACTGCT CGACAAACTG GTTGCACGCA AGTAA
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Protein sequence | MKPSERRKAR RLAVQAIYSW QLSGNNIADV EHEFLTEQSL DGVDVAYFRE LFSGVATKKT QLDELIIPHL ERPIDEVSPV EKAIVRLATY ELTFRKDVPY KVAINEAIEL AKAFGADESH KFVNGLLDKL VARK
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