| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2764 |
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| Symbol | |
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| ID | 5080831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3203011 |
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| End bp | 3207780 |
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| Gene Length | 4770 bp |
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| Protein Length | 1589 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499958 |
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| Product | putative DNA/RNA helicase |
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| Protein accession | YP_001184282 |
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| Protein GI | 146293858 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGTTG AGCAGCAACT TGAACGTGCG CGTCTGGAAT TACTTGATAT GGGTCTTCGA
TCCAACCCTC AGCTAAATTA CCGCAGTGGT AGTAAAGCAC TCGACATTAT TGATGAACAA
TCTGCCAAGA TATTTGAAAT GCTGGTTGAG CAAGAAAACA CACTCAGCTT TTTACCATTG
CCAGAAGCTT ATCAACAAAA AATTGCCGAC AGCGAAGATG AAGGTTCATT CTTTCAGACC
GACGATGAAT CGGAATTGCC ACCTCTTGAT TTATACCTCG AACAGAAAAA GGGAGCGGCC
CGCTTCACCG ACAAATACCT ACAAACCGGA TTAGTACCAG CCAAACTTGA TAAAGCACTG
CTGAAACTAG AAACCGAAGC CCATACTATG CTTCAAGAGC AAGGTGTCGA GGTTCTATAT
TTAGCACTTG GTTTTTTACA GTGGAATGAA CCAACAAACT CATCTGTCTC AAGGTATGCG
CCTTTAATTT TAATCCCAGT TCAACTAATG CGATCATCTG CCAGAGATAG CTTTAAATTG
CGCTACACAG GTGAAGATCT GGGTTCAAAC CTGACCTTAG CTGCAAAACT AAGGACTGAG
TTTAAGTTAA TGCTTCCCGC TTATTCTGAT GAGATGGTAA TCACAGATTA TTATCAGGCG
GTATCAGATG CGATTACAGC GCAACCTTCA TGGCGAGTGC ATCAGGATAA AATTGGTTTA
GGACTGTTCT CTTTTGGCAA GTTTCAAATG TACATGGACT TGGACCCTAC TGGCTGGCCG
GAAGGAAAAA AACCATCACA GTTACCGTTG ATTGGCCGCT TATTTCGTGA TGGCTTTCCC
CACGATGCAG AGATCAATCC TGCAGATCTG AATCATCCAG AAAAACTCCA CTTGGTAAAA
GACGCCGATT CCAGCCAGAT TGAAGCAATC TTGGCGATGA AGTCTGGCGC GGACCTGATC
ATTCAAGGGC CGCCAGGTAC AGGTAAATCC CAAACTATCA CCAACATTAT TGCCGAAGCG
GTTGCGCTGG GTAAAAAGGT GCTGTTTGTT GCACAAAAAA TGGCAGCACT TGAGGTGGTG
AAAAAACGCC TTGATGAAAC TCATATGGGC TATGCCGTAC TCGAACTACA TAGTCACAAA
AGTACCAAGA AATCTGTGCT TGGTTCTATT GCTGAATCAC TTGAGCAAGG TCGGCCACAA
ACCGCAAACC GAGAGCAAGA GTTTTCAGAT TTAGCGGAAT CAAAAGCCTC GCTGGATGCT
TATGTGCATG CCATCCGAGC CTCTATTCTG CGTAGCGGTA TCAATTACAT TGAAGCGTTA
GGCTCATTGC TGCAATTGAA GACAAAGGAT CCCGACAACT CCTTACCAGC CCTCCCCTTT
AGCTACTTCG AACAATGGAC AGCTGAGGAA TACAGTAATG CCAGGAAACT GGTTACAGAA
TTAGTACAGC AACTAGCACG CATTGGCATA CCTGCAGCGC ATCCATTTTC GATGTCTGGT
CGCACTGACT TTTCACCTTC GTTGCAGCAG GCCTTAACCT CTACCTTGGC AGAAATATGC
CCGTTACTTA GCCAACTTGA TGTCCAAGCC CAAACTGTCA GTGTTTTTCT TAAGCTAGAG
AAACCACAAA GCTTGCAACA AGTCACGCCG CTGATTTCAA CTACGAGCTG GCTATCCGAA
TTACCGGATC TTAAAAGCGT TAAAGTAAAT AACCCCATAT GGGCTTTAGA AAAAAAGTGG
ATCGATAACG GCCTGACCTG CCTAGCTAAT TTCTTATCAC TCAAAGCCAG CTGCGAACAG
CACTTTATCA CGCAGGCGCT GGATGCAGAT TTGCTGAGTA TCCGCCAAGG CTTGATTGGC
AAAACAGATA AATGGTGGCG TTTCCTGTCG TCCAGCTATC GCCAAGCCAA AGCACAGCTA
GCAGGGCTTT GGCTTGGCGC TCTGCCCGCT TCGTCTACTG ACTGGCTTAC TGCATTAGAT
ACTGCCTTAA CTTACCAAAG CGCGAAAAAA GAGTTAACTA GCTACCACAC TCTGTTATCT
GAAGCTTTTG GCGCGCAGTG GCAAGGCGAA TTTTCGGAGC ACAGTGAATT AACGCAAATA
AACAGCTGGA TAAACACCTT TTACACAAAG GTAAACCGCC TTGAATTGTC GCAGTCATTG
GCTGAACTGA TTGATACGGG CCTTGATAAA AAGCTGCTGC GTGACCATAC AAACTCACTG
ACAGCGCTCT GCACAGGCAT ATCTGTACAA TTGAAAACAC TGAAAGAGTT GATACAAATA
CCCAACAGCA ATCCAAACCA TGACTTAGCA GCAATGCAAT TTACGCAACT AAATGTCTGG
TTAGAAGGCT GGAAAAACTC TGCCCTACTT TACGATTTTG CACGCTACAA CCAGATTATT
AAGGCGTTTG AGCCTTATAA CATCAAGGAC TTCACTAAAT ATGCTTACTC ATGGCATGCA
GCCCCAGACT TGCTAATGAC GGTATTCGAA CTTAGCTATT ATTCTGGTCT GGTTAACTAT
GCCTATGACA GCTCAGAAGC AATACGGCAC TTTGACCGCA ATAAACATGA ACAAAGCCTA
CACGACTTTA AACGTATTGA TGGTAACAGT TTGTTTTTCG CTCAAGAATT TTTAGTAAAC
AGCCTGTACG AGCGCTTGCC AAAGAAAACA GCTAAAGGTG AAATGGAATT AGTACTGCGT
GAGTTAGGTA AGAAAAAACG CCATATTCCT ATTAGGAAAT TGCTGGCTGA AGCAGGTAAC
GTGATCCAGC AAGTAAAACC TATTTTTATG ATGAGCCCTA TGTCCATCGC CACCTACCTG
AAACAAGGTG CGTTAGATTT TGACCTGGTG ATTTTTGACG AAGCAAGTCA AATTCCAGCA
CCCGATGCCT TAGGCGCAAT GCTGCGCGGG CGGCAAGTGA TTGTGGTAGG TGACAGTAAG
CAAATGCCAC CAAGCAACCT ATTTGGTAAA GCTGTTGAAC TGGAAGAGGA AGAACTGGAA
AACAGCGCCA CCGCAGAAAT GGAAAGTATT CTGGCATTAA TGGAAGCCCG TGGTGCGGCA
AGTAAAATGC TGCGCTGGCA CTACCGTTCT CGCCACGATT CACTGATCGC AGTGTCCAAC
GACCAGTTTT ATAAAAACAA GTTAGTGGCC TTTCCAAGCC CAGGCTTTCA CCCCGATGCA
ACAGGACTGA AGTTTCATTA TTTACCTGAA ACGCATTACG ACAAAGGCGG TTCACGCATA
AATCCAGGCG AAGTAAAAGC TGTAGTAGCC GCAGTACTGA ATCACGCTTT AACTAAACCT
CACTTGTCCT TGGGTGTGGT GGCTTTTAGC CTTTCGCAAC GTGATGCCAT TTTGCTTGAG
TTGGAAAAAG AGCGCCGCTT ACAGCCTGAA ACCGACGAAT TCTTTGCACG CCATGCAGGC
GGCGACGAGT TTTTTGTAAA GAACTTGGAG AACGTGCAAG GCGACGAGCG CGACGTTATT
TTGATCAGTA TTTGTTATGG CAAAACCAGC ACAGGCCAGC TGAGCCAGAA TTTTGGTTTG
TTGAATAAGC CAGGTGGTGA ACGGCGCTTA AACGTGTTGA TCTCACGCGC GCGGCTGGCG
ATGGAAGTCT TTGCCAACTT TAGAGGTGAT GAACTAAAAG TAGAAGCAGA TAGTCCTTTT
GGCGTACGTT CGCTACAAAT CTTTTTGCAA TTTGCTGAAT CAGGCCAGTT AAACAAAGCC
TATGAAAAAG AGCAGGAGCA AAACTTTGCT TTTGGTGCAC TGCTACATCA GGCGATCCAG
CGTTTGGGGT ATCAGGTAGC AACTCGGGTC GGCAGTCAGG GGTATTACAT CGACTTAGCC
ATCAAGCATC CTGAAGACCC CAGTAAATTT GTATTGGCTC TGGAATATGA CGGCGCAGGT
TATTATGGGG CCACTTCGGC CCGTGACCGT GAACGATTGC GGCAAAGTGT GCTGGAAGGT
CTTGGCTGGA GCTTTGAACG CATTTGGTCC ACCGACTGGT TTCGCGATCC AGAGGCAGAG
TTACATCGCT TGAAAGTATT GATAGATAAA GCCATAACCC AACACAACGA ACTGATGGTA
GCAATGGCCG CACAAGCCAC TAACACCAGA CAAGTGAAAC ACAAAGTTGC GATGCCGGAG
GCCGTTGCTG CGCCAATAAT GCGGGTTGAA GAAGAACAAC CAGAGTTTGA AGCCTGCACT
ACACCCTATA AAAAAGCCGA TGTGTCTAAG CTAAATATTC CCCATGTGGA TGATTTCAGC
GCCATTCCTT TAAGTATGTT GGTGCATGCG GTGGAGCGTA TTGTTGAAAC CGAATACCCC
ATATTCGCCA GTTTAGTGGC CACCCGTTTA GCCAACGCTG CAGGACTGAC AAGAGTTGGT
GCCAAAATTA AACGCACTGT AGATCAAGCC ATAGAAAGCG CCGTTGCCAA AGGGTTAATT
AAGTTAGATA AAGACGAAGT GTTATGGCCA CAAGGCCGCA GCACAGTCAA ATTAAGAAAC
TGGAACAGCG CCGACACAGC CACCCGCAAG CTGGAAAACG TCTGTGATGC CGAGCTAACC
AACGCCTTAT TACTGACAGT GCAAGACGCC CATGCCATTA GCGTGACGGA TGCCGCTTCT
GCAGCTCTGG GCCTATTGGG CTTTCAACGG GCAACAGCTC AGGCAGCTGA GCGAATGAGC
AAGTTGGCAC AGATTCAGTG TGATAAAAAT GTGCTGGTTT GTGAGAATGA GCGGTTGAAA
ATATCAATAG CCAAGCCTTC GTTGCCCTGA
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| Protein sequence | MVVEQQLERA RLELLDMGLR SNPQLNYRSG SKALDIIDEQ SAKIFEMLVE QENTLSFLPL
PEAYQQKIAD SEDEGSFFQT DDESELPPLD LYLEQKKGAA RFTDKYLQTG LVPAKLDKAL
LKLETEAHTM LQEQGVEVLY LALGFLQWNE PTNSSVSRYA PLILIPVQLM RSSARDSFKL
RYTGEDLGSN LTLAAKLRTE FKLMLPAYSD EMVITDYYQA VSDAITAQPS WRVHQDKIGL
GLFSFGKFQM YMDLDPTGWP EGKKPSQLPL IGRLFRDGFP HDAEINPADL NHPEKLHLVK
DADSSQIEAI LAMKSGADLI IQGPPGTGKS QTITNIIAEA VALGKKVLFV AQKMAALEVV
KKRLDETHMG YAVLELHSHK STKKSVLGSI AESLEQGRPQ TANREQEFSD LAESKASLDA
YVHAIRASIL RSGINYIEAL GSLLQLKTKD PDNSLPALPF SYFEQWTAEE YSNARKLVTE
LVQQLARIGI PAAHPFSMSG RTDFSPSLQQ ALTSTLAEIC PLLSQLDVQA QTVSVFLKLE
KPQSLQQVTP LISTTSWLSE LPDLKSVKVN NPIWALEKKW IDNGLTCLAN FLSLKASCEQ
HFITQALDAD LLSIRQGLIG KTDKWWRFLS SSYRQAKAQL AGLWLGALPA SSTDWLTALD
TALTYQSAKK ELTSYHTLLS EAFGAQWQGE FSEHSELTQI NSWINTFYTK VNRLELSQSL
AELIDTGLDK KLLRDHTNSL TALCTGISVQ LKTLKELIQI PNSNPNHDLA AMQFTQLNVW
LEGWKNSALL YDFARYNQII KAFEPYNIKD FTKYAYSWHA APDLLMTVFE LSYYSGLVNY
AYDSSEAIRH FDRNKHEQSL HDFKRIDGNS LFFAQEFLVN SLYERLPKKT AKGEMELVLR
ELGKKKRHIP IRKLLAEAGN VIQQVKPIFM MSPMSIATYL KQGALDFDLV IFDEASQIPA
PDALGAMLRG RQVIVVGDSK QMPPSNLFGK AVELEEEELE NSATAEMESI LALMEARGAA
SKMLRWHYRS RHDSLIAVSN DQFYKNKLVA FPSPGFHPDA TGLKFHYLPE THYDKGGSRI
NPGEVKAVVA AVLNHALTKP HLSLGVVAFS LSQRDAILLE LEKERRLQPE TDEFFARHAG
GDEFFVKNLE NVQGDERDVI LISICYGKTS TGQLSQNFGL LNKPGGERRL NVLISRARLA
MEVFANFRGD ELKVEADSPF GVRSLQIFLQ FAESGQLNKA YEKEQEQNFA FGALLHQAIQ
RLGYQVATRV GSQGYYIDLA IKHPEDPSKF VLALEYDGAG YYGATSARDR ERLRQSVLEG
LGWSFERIWS TDWFRDPEAE LHRLKVLIDK AITQHNELMV AMAAQATNTR QVKHKVAMPE
AVAAPIMRVE EEQPEFEACT TPYKKADVSK LNIPHVDDFS AIPLSMLVHA VERIVETEYP
IFASLVATRL ANAAGLTRVG AKIKRTVDQA IESAVAKGLI KLDKDEVLWP QGRSTVKLRN
WNSADTATRK LENVCDAELT NALLLTVQDA HAISVTDAAS AALGLLGFQR ATAQAAERMS
KLAQIQCDKN VLVCENERLK ISIAKPSLP
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