Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2755 |
Symbol | ispD |
ID | 5080822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3191294 |
End bp | 3192055 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640499949 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_001184273 |
Protein GI | 146293849 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.312562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATGG ATATCGCATT AGAAGAAAGA CCCCATTTAG AACATCAGCC GCAAATGATG ATAAAAGCAA ATCCAGATCC CCAAAGCGTT GTCGCGATCG TGCCCGCAGC AGGAATTGGT AGCCGCATGG GGGCCGATAA ACCCAAGCAA TATCTTGAGG TATTAGGTCA AAGTATTCTT GCCCATACGT TAGATACACT ATTGTCGCAT CAACAAATCA CCCAAGTGAT TATTGCACTA CATCCTAATG ACTCATTTTT TTACGCATTA CCACAAGCGC AACATCCAAA ACTTATCACA GTGCTTGGTG GCGGTGAGCG TGCTGATTCA GTGTTGGCGG CGTTGATGAA AGCGCCTGAA GATAGTTGGG CCTTGGTACA TGACGCAGCA AGGCCCTGTT TAACCTTGGT TGATATCGAT AAATTACTTG TGTCACGTGC CGATTTCCCC CATGGGGCGA TATTGGCAAT GCCAGTGCGT GATACGATGA AGCGTGCTAA TCAAAAAGGG GAAATAAGTG CAACTGTTTG CCGCGATAAT TTATGGCATG CGTTGACGCC GCAATTATTT CCAACATCTG AGTTGAAAAT GCATCTTCAA GCGGCAATCC TAGCTGGTGT AACGGTTACG GATGAAGCCT CTGCCATGGA ATGGGCAGGG ATATCGCCGG GGCTGGTTTC TGGCCGTGCC GACAATATCA AAGTCACACA TCCCGATGAT CTGGAGCTGG CTGAACTCTT TTTAATGCGC GTTGCAAAAT AG
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Protein sequence | MRMDIALEER PHLEHQPQMM IKANPDPQSV VAIVPAAGIG SRMGADKPKQ YLEVLGQSIL AHTLDTLLSH QQITQVIIAL HPNDSFFYAL PQAQHPKLIT VLGGGERADS VLAALMKAPE DSWALVHDAA RPCLTLVDID KLLVSRADFP HGAILAMPVR DTMKRANQKG EISATVCRDN LWHALTPQLF PTSELKMHLQ AAILAGVTVT DEASAMEWAG ISPGLVSGRA DNIKVTHPDD LELAELFLMR VAK
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