| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2745 |
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| Symbol | alaS |
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| ID | 5080812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3178670 |
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| End bp | 3181348 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499939 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001184263 |
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| Protein GI | 146293839 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.376883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCTGC CCTATGGTGT AGCTGGTAAT GCTTATCCAA TTCAGGACGA TTTCATGTAT
CAAACTACAG CAGAGCTTAG AAGTGCTTTC CTCGAATTTT TCCGCAGCCA CGGTCATCAG
GTTGTGGACA GTAGTTCATT AGTGCCAGGC AACGATCCAA CTCTTTTATT TACCAATGCG
GGCATGAACC AATTTAAGGA CGTGTTTCTT GGCATGGATA AACGCAATTA CACGCGTGCG
ACCACTGCTC AACGTTGTGT ACGCGCTGGC GGTAAACATA ATGATTTAGA TAATGTGGGA
TATACCGCCC GTCACCATAC TTTCTTCGAA ATGTTAGGTA ACTTCAGCTT TGGGGATTAT
TTCAAAGAAG AAGCGATTTG TTTTGGTTGG TCATTTTTAA CTGAAACCTT AAAGCTGCCG
AAAGAACGTC TGTGCGTCAC TATCTACCAA ACTGACGATG AAGCCTTTGA AATTTGGAAT
AAAAAGATTG GTGTGGCCGC TGAAAATATC ATTCGTATCG GTGATAACAA GGGCGCACCT
TACGCTTCAG ATAACTTCTG GCAAATGGGT GACACTGGTC CTTGTGGTCC TTGTACCGAG
ATTTTCTATG ACCATGGTGA TCATATTTGG GGTGGACGTC CTGGTAGCCC AGAAGAAGAT
GGCGATCGTT TCATCGAAAT TTGGAATATT GTATTCATGC AATACAATCG CCACATTTCA
GGCGAAATGT TGCCGCTACC AAAACCTTCT GTCGATACAG GTATGGGGAT CGAACGTATT
GCTGCGATTA TGCAAGGCGT ACATTCTAAC TATGAAATCG ATATCTTCCG TGCTCTTATT
GCCAAAGCCG CAGAAATTAT CGGCGTGACT GATTTATCCA ATAAATCACT ACGCGTTATT
GCTGACCATA TTCGCTCATG TGCATTTTTA GTGGCCGATG GTGTAATGCC ATCTAACGAA
GGCCGTGGCT ATGTGCTGCG CCGTATTATC CGCCGCGCCG TGCGTCATGG TAATAAGTTA
GGTGCGACCG AAGCCTTTTT CTACAAATTA GTTCCGACGC TGATTGATGT GATGGGGGAT
GCAGCCAAGG GGCTCGCTGA AACTCAAGTT ATTGTTGAAA AAGCACTTAA AGCGGAGGAG
GAGCAGTTTG CTCGTACTTT AGAGCGTGGT TTAGGTATTT TAGACGCAGC CTTAAGCGAA
TTAACCGGTG ACACTTTAGA CGGTGAAACC GTATTCAAAC TCTATGATAC CTACGGTTTT
CCAATGGATT TAACCGCAGA CGTTTGTCGT GAGCGTAATA TTATTGTCGA TGAGGCAGGT
TTTGAAGCGG CAATGGCTGA GCAACGTAGC CGCGCCCAAG CAGCGGGTAA CTTTGGTGCC
GATTACAATG CGGCATTGAA AATTGACGCC GAAACAGCAT TCTGCGGTTA CACCGAACTT
GTGGGTCAAG CAAAAGTCAC CGCGATTTAT CAAAACGGCG AGTCAGTGAC GGCTATTAAA
GCGGGTGATG AAGCGGTTCT TGTGCTAGAC GTGACACCTT TCTATGCTGA ATCGGGCGGT
CAAGTGGGCG ATAAAGGCCA ATTGGTTGCG AATGGTATTG AATTTACGGT AAACGATACG
CAAAAGTATG GTCAAGCAAC AGGCCATCAA GGTGTCTTAG TCGCAGGGAG CTTGAGTATT
GGCCAAATGG TTGAGGCTAA GGTTGATAAA AAATTACGTC ACCGTACTCA GTTAAACCAT
TCTGTTACGC ATTTATTACA TGCCGCACTG CGCCAAGTGC TTGGTACGCA TGTCACGCAA
AAAGGGTCGC TGGTTGATCC TGAGCGTTTA CGTTTCGATT TCTCTCATTT CGAAGCAGTC
AAACCTGCGG AACTAAAGAA AGTCGAAGAA TTAGTGAATA CCCAAATTCG CCGTAACCAC
GAGCTGAAAG TCGCTGAAAT GGCGATTGAT GAAGCTAAAG AAAAAGGTGC TATGGCACTC
TTTGGTGAGA AGTACGATGC ACAGGTTCGT GTTGTCACTA TGGGCGATTT CTCTATCGAA
TTGTGTGGTG GTACCCACGT TGGCCGTACC GGTGACATTG GTCTGTTCAA AATTACCTCT
GAAGGCGGTA TTGCTGCGGG CGTTCGCCGT ATTGAAGCGG TAACCGGTGC TGCAGCTATG
GCTTATGTGG CGCAGCAACA GGCTGAGCTG GAAGAGGCGG CTGCCTTGTT AAAAGGCGAT
ACTCATTCAG TGGTTGCTAA GTTAAAAGCA CAACTCGATA AAATGAAACA ACTTGAAAAA
GACATGGCGC AGCTAAAAGA TAAATTAGCG GCGGCTGCGA GTGCTGACTT AGTGGGCGAT
GCTGTGGTTG TTAATGGCGT GAATGTACTT ATCAAAAAAC TAGATGGCGT TGAGGCTGGT
TCACTTCGCG GTTTACAAGA TGAATTAAAG CAAAAACTAA AATCTGCCAT TATTGTGTTG
GGTACGGCTC AAGAAGGCAA AGTGAATCTG ATTGCTGGCG TGAGTAACGA CTTAGTTGGC
AAAGTCAAAG CGGGTGAGCT AGTCGCTATG GTCGCTGCAC AAGTGGGCGG CAAGGGCGGT
GGTCGTCCAG ATATGGCGCA AGCGGGTGGT AGCCAACCAG AAAATCTGGA TGCGGCCTTA
GCTCAAGTAT TACCTTGGAT TACTGAGCGT TTAGCTTAA
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| Protein sequence | MRLPYGVAGN AYPIQDDFMY QTTAELRSAF LEFFRSHGHQ VVDSSSLVPG NDPTLLFTNA
GMNQFKDVFL GMDKRNYTRA TTAQRCVRAG GKHNDLDNVG YTARHHTFFE MLGNFSFGDY
FKEEAICFGW SFLTETLKLP KERLCVTIYQ TDDEAFEIWN KKIGVAAENI IRIGDNKGAP
YASDNFWQMG DTGPCGPCTE IFYDHGDHIW GGRPGSPEED GDRFIEIWNI VFMQYNRHIS
GEMLPLPKPS VDTGMGIERI AAIMQGVHSN YEIDIFRALI AKAAEIIGVT DLSNKSLRVI
ADHIRSCAFL VADGVMPSNE GRGYVLRRII RRAVRHGNKL GATEAFFYKL VPTLIDVMGD
AAKGLAETQV IVEKALKAEE EQFARTLERG LGILDAALSE LTGDTLDGET VFKLYDTYGF
PMDLTADVCR ERNIIVDEAG FEAAMAEQRS RAQAAGNFGA DYNAALKIDA ETAFCGYTEL
VGQAKVTAIY QNGESVTAIK AGDEAVLVLD VTPFYAESGG QVGDKGQLVA NGIEFTVNDT
QKYGQATGHQ GVLVAGSLSI GQMVEAKVDK KLRHRTQLNH SVTHLLHAAL RQVLGTHVTQ
KGSLVDPERL RFDFSHFEAV KPAELKKVEE LVNTQIRRNH ELKVAEMAID EAKEKGAMAL
FGEKYDAQVR VVTMGDFSIE LCGGTHVGRT GDIGLFKITS EGGIAAGVRR IEAVTGAAAM
AYVAQQQAEL EEAAALLKGD THSVVAKLKA QLDKMKQLEK DMAQLKDKLA AAASADLVGD
AVVVNGVNVL IKKLDGVEAG SLRGLQDELK QKLKSAIIVL GTAQEGKVNL IAGVSNDLVG
KVKAGELVAM VAAQVGGKGG GRPDMAQAGG SQPENLDAAL AQVLPWITER LA
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