Gene Sputcn32_2743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2743 
Symbol 
ID5080810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3177088 
End bp3177285 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content44% 
IMG OID640499937 
Productcarbon storage regulator 
Protein accessionYP_001184261 
Protein GI146293837 
COG category[T] Signal transduction mechanisms 
COG ID[COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) 
TIGRFAM ID[TIGR00202] carbon storage regulator (csrA) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000840228 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATTT TGACTCGTCG TGTTGGCGAA ACACTGATGA TTGGTGACGA AGTCACTGTT 
ACAGTGCTGG GGGTAAAAGG AAATCAGGTG CGTATCGGTG TTAACGCACC TAAAGAGGTT
TCTGTTCACC GTGAAGAAAT CTATCAACGT ATCCAATCTG AAAAATCGGG TTCACCATCG
GAAGGTGGTA ACTTTTAA
 
Protein sequence
MLILTRRVGE TLMIGDEVTV TVLGVKGNQV RIGVNAPKEV SVHREEIYQR IQSEKSGSPS 
EGGNF