| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2742 |
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| Symbol | valS |
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| ID | 5080801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3172672 |
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| End bp | 3175548 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640499928 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001184260 |
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| Protein GI | 146293836 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.829752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAA CATACGATCC GCAATCCATC GAGCAAACGC TTTACCAAAA CTGGGAAGCG
CAAGGTTACT TCAAACCACA CGGTGATGAA TCCAAAGGCA ATTATTGCAT CATGATCCCG
CCACCCAACG TGACGGGGAG CTTGCATATG GGCCATGCCT TCCAAGACAC CATCATGGAT
ACCTTGACCC GTTACCAACG GATGAAAGGT AAAAATACCC TATGGCAAGT CGGTACTGAC
CATGCGGGTA TCGCCACCCA AATGTTGGTA GAGCGTAAAC TTGAAGCCGA AGAAGGCAAG
AATCGCCATG ACCTAGGTCG CGATGCCTTT ATGGATAAAG TGTGGGAATG GAAAGCGCAA
TCGGGTGGCA CTATCACGAA GCAGCTACGT CGTATGGGTG CCTCTGTTGA TTGGGACCGC
GAGCGTTTCA CTATGGACGA AGGCTTGTCC AAGGCCGTGC AAGAAGTGTT TGTGCGTCTG
TACGAAGACG AGTTGATTTA TCGCGGCAAG CGTTTGGTCA ACTGGGATCC AAAGCTGCAC
ACGGCTATCT CTGATTTAGA AGTGGAAAGC AAAGAAAAAC AGGGCCATAT GTGGCACCTG
CGTTATCCAC TGGCCGACGG TGAGCTAACC GCCGATGGTA AAGACTATTT AGAAGTTGCT
ACCACACGTC CAGAAACTAT GCTCGGCGAC AGTGCGGTTG CAGTACATCC CGATGATGAA
CGTTATCAAG CGTTGATTGG CAAATATATT CTGCTGCCAA TAGTAAATCG CCGCATTCCT
ATCGTGGCCG ACGATTACGT CGATATGGCC TTTGGTACAG GTTGCGTGAA GATCACCCCA
GCCCATGACT TTAACGACTA TGAAGTCGGT AAACGTCACA ACCTGCCCAT GTTCAACGTG
CTGACCTTAG ATGCCGCCAT TCGCGTGAGC GCCGAAGTGG TGAACTCTGA CGGTACCTTT
AACAAAACGC TCGATGGCAG CCTGCCTGAA CGCTTTGCCG GACTTGACCG TTTTAAAGCG
CGTGACGCTA TCGTCGCCGA ATTTGAAACT TTAGGGTTGC TCGAAAAAAT CGCGCCTCAC
GCCTTAAAAG TCCCTTATGG CGATCGCTCC GGTGTAGTTA TCGAACCTAT GCTGACCGAC
CAATGGTATG TGGCTGTTGC GCCAATGGCG AAAACCGCTA TCGAAGCCGT TGAAAATGGC
AGCATCAAGT TTGTGCCGCA GCAATACGAG AACATGTACT TCTCGTGGAT GCGTGACATT
CAAGACTGGT GTATTTCACG TCAATTGTGG TGGGGTCACC GTATCCCAGC TTGGTACGAC
GAAAACGGCA AAGTCTATGT CGGCCGCAAC GAAGCCGAGG TACGTGCTAA GCACAATATT
GCCGACTCAA TGACATTACG CCAAGACGAA GACGTACTGG ACACTTGGTT CAGCTCAGCC
CTGTGGACTT TCTCGACCTT AGGTTGGCCT GACAATTTAG AAGATTTAAA AACCTTCCAC
CCAACCGACG TGTTGGTGAC AGGTTTTGAC ATCATCTTCT TCTGGGTTGC CCGTATGATC
ATGATGACCA TGCACTTCAT CAAAGATGAA GACGGTAAAC CACAAGTCCC GTTCAAAACC
GTCTACGTAA CCGGTCTTAT CCGCGATGAA GCGGGTAACA AGATGTCAAA ATCTAAGGGC
AACGTACTCG ATCCATTAGA CATGATCGAC GGTATCGGCC TTGAAGATTT AGTTGAAAAA
CGTACCGGTA ATATGATGCA GCCACAACTG GCCGCCAAGA TTGAAAAGAG CACTCGCAAA
GAGTTTGAAA ATGGCATCGA AGCCCACGGT ACTGATGCGC TGCGCTTTAC GCTTGCCGCT
ATGGCATCAA CGGGCCGTGA CATCAACTGG GATATGAAGC GCTTAGACGG TTACCGCAGC
TTCTGTAACA AGTTGTGGAA CGCCTCGCGC TACGTGCTGA TGAACACAGA AGATCAAGAT
TGTGGCCCTG GCTCACCAAA ATACAAAGGT GGCGAGCTAG AACTATCACT AGCCGATCGC
TGGATTATCG GCTTGTTCAA TCAAACCGTT AAGACCTTTG ACGATCACAT GGCGGCCTAT
CGTTTCGACT TAGCGGCCAA TACCCTGTAT GAGTTCACTT GGAACCAGTT CTGTGACTGG
TACTTAGAGT TAACTAAACC GGTATTGCAA AACGGCAGTG AAACGCAAAT GCGCGGTACT
CGCCACACCT TAGTGACGGT GCTCGAAGCG ATGCAGCGCC TGATGCACCC TATGATGCCA
TATATTACTG AAACCATTTG GCAACGCGTT AAACCGTTAG CTGGTGTCGC TGGTGATACC
ATTATGCTGG CACCGTTCCC AACATTTGAT GCCGCTAAAG TCGATAGCGC AGCAATGGCC
GATTTAGAGT GGGTTAAGCA AGTGATTGTC GCTGTACGTA ACATTCGCGC CGAACTGAAC
ATTGCCCCAT CTAAGCCATT AAATGCCCTA CTTCGTGGTG TTAGCGCGCA GGATAAAGCC
CGTGTAGAAG CAAACCAAAC CTTCTTTACT ACGCTTGCCC GCTTAGAAAG CATGACCATT
TTAGCCGATG GCGAAACTGC GCCTATGTCG ACCACAGGTT TGATTGGTGA AATGGAACTG
TTGATCCCAA TGGCAGGTTT AATCGATGTT GCCGCCGAAA TGGCCCGTAT CGACAAACAG
CTTGAAAAGC TCGGCCAAGA GATCGCTCGC ATCGAAGGTA AATTGTCGAA CCAAGGTTTT
GTGGCAAAAG CCCCAGCCGA GGTTATCGAC AAAGAGCGCG CTAAGATGGC CGATCTCAAG
CGAGATATGG ACAAGCTCAA CGAACAAAAA TCTGAGTTCG CTAAGTTAGA AGCTTAA
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| Protein sequence | MEKTYDPQSI EQTLYQNWEA QGYFKPHGDE SKGNYCIMIP PPNVTGSLHM GHAFQDTIMD
TLTRYQRMKG KNTLWQVGTD HAGIATQMLV ERKLEAEEGK NRHDLGRDAF MDKVWEWKAQ
SGGTITKQLR RMGASVDWDR ERFTMDEGLS KAVQEVFVRL YEDELIYRGK RLVNWDPKLH
TAISDLEVES KEKQGHMWHL RYPLADGELT ADGKDYLEVA TTRPETMLGD SAVAVHPDDE
RYQALIGKYI LLPIVNRRIP IVADDYVDMA FGTGCVKITP AHDFNDYEVG KRHNLPMFNV
LTLDAAIRVS AEVVNSDGTF NKTLDGSLPE RFAGLDRFKA RDAIVAEFET LGLLEKIAPH
ALKVPYGDRS GVVIEPMLTD QWYVAVAPMA KTAIEAVENG SIKFVPQQYE NMYFSWMRDI
QDWCISRQLW WGHRIPAWYD ENGKVYVGRN EAEVRAKHNI ADSMTLRQDE DVLDTWFSSA
LWTFSTLGWP DNLEDLKTFH PTDVLVTGFD IIFFWVARMI MMTMHFIKDE DGKPQVPFKT
VYVTGLIRDE AGNKMSKSKG NVLDPLDMID GIGLEDLVEK RTGNMMQPQL AAKIEKSTRK
EFENGIEAHG TDALRFTLAA MASTGRDINW DMKRLDGYRS FCNKLWNASR YVLMNTEDQD
CGPGSPKYKG GELELSLADR WIIGLFNQTV KTFDDHMAAY RFDLAANTLY EFTWNQFCDW
YLELTKPVLQ NGSETQMRGT RHTLVTVLEA MQRLMHPMMP YITETIWQRV KPLAGVAGDT
IMLAPFPTFD AAKVDSAAMA DLEWVKQVIV AVRNIRAELN IAPSKPLNAL LRGVSAQDKA
RVEANQTFFT TLARLESMTI LADGETAPMS TTGLIGEMEL LIPMAGLIDV AAEMARIDKQ
LEKLGQEIAR IEGKLSNQGF VAKAPAEVID KERAKMADLK RDMDKLNEQK SEFAKLEA
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