| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2734 |
|---|
| Symbol | |
|---|
| ID | 5079949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 3163678 |
|---|
| End bp | 3164640 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640499920 |
|---|
| Product | homoserine kinase |
|---|
| Protein accession | YP_001184252 |
|---|
| Protein GI | 146293828 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0083] Homoserine kinase |
|---|
| TIGRFAM ID | [TIGR00191] homoserine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTGA CTGTTTACGC TCCAGCCTCT ATGGGTAACG TGGGCGTCGG ATTTGATTTA
CTCGGTGCTG CATTAGCGCC GATTGATGGT AGTTTACTGG GCGACAGAGT GACTATCGCC
GCGGCAGCGT CGGGTGTGAG TCTTATGCAA ACCGGCGCTT GGGCCCATAA ACTGCCTGAT
AATCCGCAAG ACAATATTGT GTACCAATGT GCCGAATTCT TCTTAACAGC CCTGAGTAAG
GAGTTTTTAG AAGCGCTTGG TAAAGCTGAT GAAGGCGTGG CACTCACACT GGAAAAGAAC
CTGCCCGTCG GTAGTGGGTT AGGGTCGAGT GCAAGCTCTG TCGTGGCGGC GTTATATGCC
TTGAATGAAC ATTTTGATAG ACCCTATAAC GAGCAAGCAC TGCTAGAACT GATGGGCGAG
TTTGAAGGGA AGATCAGCGG CAGTGTGCAC TATGACAACG TTGCCCCCTG TTATTTGGGC
GGCATGCAAT TGATGCTTAA TGTGCCGGGT ACAGTTTGCG AAGCAATACC CAGTTTTAAA
GAATGGTATT GGGTTGTGGC CTATCCAGGG ATTTCACTCT CAACGGCAAT GATGCGCAAA
CTCATGCCCG ATCAATATGA TAAAAGTGTC ACTATCGATT TTGGCCGCTA TTTAAGCGCC
TTTGTTCATG CGTCTTACCA GCAGAATGCC AAGCTTGCGA TTAGCGTATT AAAGGATGTG
TTAGCCGAGC CTTATCGCGC CGCCGCGATC CCGGGTTACG ACAAGGCCAG AGCCGCTTTA
GCCGATTTAG GCATGTTGAC TACGGGGATT TCGGGCAGCG GCCCAACGCT GTTTTCGATT
ACCGATGATT TAGCCACGGC AAATATCGCT AAAGCTTGGT TAGAACTGCA TTATCTCACC
GAGGCGGGTG GCTTTGCCCA TGTGTGTCGC TTAGATGAGC AGGGCACGCG TAGGGTCGAT
TAA
|
|---|
| Protein sequence | MSLTVYAPAS MGNVGVGFDL LGAALAPIDG SLLGDRVTIA AAASGVSLMQ TGAWAHKLPD
NPQDNIVYQC AEFFLTALSK EFLEALGKAD EGVALTLEKN LPVGSGLGSS ASSVVAALYA
LNEHFDRPYN EQALLELMGE FEGKISGSVH YDNVAPCYLG GMQLMLNVPG TVCEAIPSFK
EWYWVVAYPG ISLSTAMMRK LMPDQYDKSV TIDFGRYLSA FVHASYQQNA KLAISVLKDV
LAEPYRAAAI PGYDKARAAL ADLGMLTTGI SGSGPTLFSI TDDLATANIA KAWLELHYLT
EAGGFAHVCR LDEQGTRRVD
|
|---|
| |