| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2732 |
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| Symbol | |
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| ID | 5079947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3161246 |
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| End bp | 3162100 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640499918 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001184250 |
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| Protein GI | 146293826 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTGGT TTAAAAGTGT CTCTTACTTG TTTATGTTTA TCTTGCTAAC CCATGGGGTA
TCGCAAGCCG AGAAACTTTT GCCTTGCACT AACACTATCC GAGTTGGTTA CAACAACTGG
CCTCCGTATG CCTGGCAAGA TCCTAAGGGA CAAGCCCATG GACTCGATGT TGATCTTATG
CGGGCATTTG CACTTTACCT TGGGTGTGAA GTGAGTTTTA TCAATGTGCC AGCCAAACGA
TCCCATCAGA TGCTAAAAAC TGGGGAGTTA GATGTGATGA TGGGAGCAAC GATGACAGAT
GCACGGCAAG CATATGCATT GTTCACTGTG GATTATCGAG ATGAAGAAGT ACGTTTTTTT
GTACTTGATG AACAAAAAGA TCTGATTAAT GTTGAGAGTT GGGCGGATAT TTTTACTCGA
AAATTACGAT TGCTTGTTCC TTCTAGTGGT TGGTATGGCG CTGATTACCA TAGACTCCAA
TACCAACTAG AACGGGAGTA TTTGCTCGTT TTAAGTCCTG ATGCAAGTAA ATCAGTACAA
ATGCTTACCT ATGGTAGAGG CGATATAATT TTGGGCGATG CGATGGCGGT TCCCTACATT
GCTAGCCAGT ATCAGAATAT TAAGTTAGTT CCATTAACAT TAGTGTTAGA CAAAAGTCAT
ATCCATCTAA TGCTAAGTAA AATGAGCATG ACACCTTTAC AGCTTGCTCA GTTCAATATT
GCGATTAATG CGTTGAAGGA CAACGGAGAA ATTACCAAGG TTATTCATAA GTGGCAGTTA
CTCTCTATTG CGAAGCAATC AAACATGAGT CAGCAAAATT ATCCTATCAA CATTCTATAT
GTTTCTGATT TTTAA
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| Protein sequence | MLWFKSVSYL FMFILLTHGV SQAEKLLPCT NTIRVGYNNW PPYAWQDPKG QAHGLDVDLM
RAFALYLGCE VSFINVPAKR SHQMLKTGEL DVMMGATMTD ARQAYALFTV DYRDEEVRFF
VLDEQKDLIN VESWADIFTR KLRLLVPSSG WYGADYHRLQ YQLEREYLLV LSPDASKSVQ
MLTYGRGDII LGDAMAVPYI ASQYQNIKLV PLTLVLDKSH IHLMLSKMSM TPLQLAQFNI
AINALKDNGE ITKVIHKWQL LSIAKQSNMS QQNYPINILY VSDF
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