Gene Sputcn32_2728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2728 
Symbol 
ID5079943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3154912 
End bp3156576 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content44% 
IMG OID640499914 
ProductPepSY-associated TM helix domain-containing protein 
Protein accessionYP_001184246 
Protein GI146293822 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA CATTTTTTAG AACCTTATCT TGGCTTCACA CTTGGGCAGG TTTACTGGTG 
TGCTGGGTAT TATTGTTGAT CTTTTTCGCT GGTAGCTTGA GCTATTTTCG CCACGAAATT
ACACAGTGGA CTAAACCCGA ATTACACAGT GGTGTTTATC AAGAATATCA ATCCTCCTCA
ATCGAAAAAC AGCTAGATAA GGGCCAAGGT TATATAGAAG AACATTCCCC TCAATTGGCA
CAGCGTTGGA TGATAAGTTT TCCAACTGAG CGTCAACCAT TGTTGAGTTA TAGTTGGCAA
TTGCCGCCAG AAAAAGGCCA GCGTCGTGGC AAGATAGAGG AACATGTTGC CTTGGCTGAT
GGTAGCGCGA CTCTCTCCGA CATCAGAGAG AGTCGCGGAG GCAATTTTTT CTATCGTCTA
CACTTTGACT TGCATTATAT GCCCGCCATT ACGGCCCGCT ATATTGTCGG TTTTTGTACT
ATGTTTATGC TAATCGCCCT AATTAGCGGC ATAGTGATAC ATAAGCGTAT TTTCAAGGAT
CTATTCAGTT TTAGACGTGG AAAAGGTGCT CGTTCTTGGT TAGATGCCCA TAATGTGAGT
TCAGTGATCG CGCTGCCCTA CCACATCATG ATCACCTACA CCGGACTTAT CACCCTGATG
TTACTTTATA TCCCTTGGAC AGTGACTACC GCCTACTCTG GGGATAATCA AGCATTTTTA
CAGGATCTAA ATCCTGCAAG ACAAACTGAG AAACCAGCAG GAATTGCAGC ACCATCTATA
CAGTTGAGTC AATTAGTGCC TCAGGTAAAG GCTGCTTGGG GAGATGCCCC CATAAAACAA
GTCATTCTGT CAAATCCCAA CGATCAAAAT AGCCAAGTAA CCTTTTATCA AAACACAGGA
AAGGATGTCA CAGACGAAGC AAATATTTTG ATATTTAGTG GTGTAACGGG TGAGCTTAAA
TATGCTAGCC CCCACGATGC ATCGGGTGCA TTAACAACTT ACGATACTAT GATGTCGCTT
CACACAGCAC GATTTGCTGG GGCATTACTC AGAATTTTAT TCTTTTTCTG TGGTTTATTA
GGTTGCGCTA TGGTGGCAAC AGGCACACTC ATGTGGGCGA TTCGTATACG TCAAAAGCAA
CAAAAAGAAA TAGATAAAGG TGAAAAACCA AGCTTTGGCT TACGTTTGGT AGAAGGATTA
AACTTTATGT TTATTATCGG ACTACCATTA GGAACCGTTG CATTCTTTTA CGCTAACCGT
TTATTACCCG CCCAGCTAAT AGGCCGTGCG GAGTGGGAAG TTCACAGCTT CTTTATCGCT
TTGGCCACGA TGGGGATTTG GGCTATTTAT GGCCGCTCAC GCCGTCATTG GCGAATGGCG
TTAATGATGA CGGGCATATT ATGCTGTACT CTCCCCGTGC TCAATGCGCT CACATCTCCC
CATAATATCG TCGACAATAT CCAATCAAAC CAATGGGCCC TCGTTGGTTT CGATCTACTT
ACATTGCTGT TAGGTGGCCT TATGTTGTTT GCTAGCCAAA AACTGACGTT GATTGCGACG
ACACCAGCTA AGCGTCCAGA AAGGTCCTCT CGAAACCGCC CTAGTGCGCA GACATCATCC
GTAGCAACAG AACTGAGTTC GTCATTAGAG GAAGCCAAAT CATGA
 
Protein sequence
MKETFFRTLS WLHTWAGLLV CWVLLLIFFA GSLSYFRHEI TQWTKPELHS GVYQEYQSSS 
IEKQLDKGQG YIEEHSPQLA QRWMISFPTE RQPLLSYSWQ LPPEKGQRRG KIEEHVALAD
GSATLSDIRE SRGGNFFYRL HFDLHYMPAI TARYIVGFCT MFMLIALISG IVIHKRIFKD
LFSFRRGKGA RSWLDAHNVS SVIALPYHIM ITYTGLITLM LLYIPWTVTT AYSGDNQAFL
QDLNPARQTE KPAGIAAPSI QLSQLVPQVK AAWGDAPIKQ VILSNPNDQN SQVTFYQNTG
KDVTDEANIL IFSGVTGELK YASPHDASGA LTTYDTMMSL HTARFAGALL RILFFFCGLL
GCAMVATGTL MWAIRIRQKQ QKEIDKGEKP SFGLRLVEGL NFMFIIGLPL GTVAFFYANR
LLPAQLIGRA EWEVHSFFIA LATMGIWAIY GRSRRHWRMA LMMTGILCCT LPVLNALTSP
HNIVDNIQSN QWALVGFDLL TLLLGGLMLF ASQKLTLIAT TPAKRPERSS RNRPSAQTSS
VATELSSSLE EAKS