| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2718 |
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| Symbol | |
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| ID | 5079933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3142613 |
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| End bp | 3143854 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640499904 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001184236 |
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| Protein GI | 146293812 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.695132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTCA GTTCCTTATC TTTAAATACC ACTCTAGTGA ATACCATAAC CGAACTGGGT
TACTCGTTAC CCACACCCAT TCAATCGGAA GCAATTCCAG TCATTTTAGC CAAACAAGAT
GTGATGGCCG GCGCACAGAC AGGTACGGGT AAAACGGCTG CATTTGCACT CCCTATTTTA
CATCTGCTTA TGGCTAAAAA TGTAGAACAG AAGGCTGAGA GGGTAAAAAC CGTACAAGCA
TTAGTCTTAG TGCCAACACG TGAGTTAGCG GTACAAGTAC ATCAAAGCTT TGTTAAATAT
GCTAAAAATA CAGATATTCG TATAGGTATA GCCTATGGTG GCGTGAGTAT TGATGCGCAA
GTCGATGTAT TTAAAACAGG TATTGATGTG CTAATTGCAA CCCCTGGGCG ATTGCTCGAT
CATCTTCGTC AAGGAGTCTT AAACCTTAAT CAACTCAGTA CATTAGTTTT CGATGAAGCC
GACCGTATGC TTGATATGGG GTTTATGGAT GAAATTAATG CAGTGCTTAA ACAAGTGCCT
AAGGACAGAC AAACGCTACT TTTTTCTGCC ACCTTAGATG ATGCGATATT TGAGTTGAGT
AAATCTTTAC TACGTGAGCC TAAATTAATC GAAGTGACTA AACGTAATAC GACCGCAGCA
CAGGTTGAGC AACGAGTGTA TGCCATTGAT AGCGATCGTA AAACTGAGTT TGTTAGTCAC
TTGATTCGTT CGAATTATTG GCACCAAGTG CTTATTTTTA GTCGTACTAA GCAAGGTGTT
GATAGACTTG TACAGCAGTT AAATAAACTG AGTATTGTCA CTCATGCCTT CCATGGTGAT
TTGTCCCAAG GCGCACGGGA AAAAGTATTA CAAGCATTTA AACTGGGTAA TATTCAGGTG
TTAGTGGCCA CCGATGTTGC TGCCCGAGGG CTAGATATTG TTGAATTAAA ATATGTGATT
AATTTTGAAT TGCCCTTTAT TGCTGAAGAC TATATTCACC GTATCGGCCG TACGGGGCGA
GCGGGGAGTG CAGGCCTTGC TATCACGCTG TTTAGCCAAG AAGATACATT ATTACTAGAA
GAAGTTGAAG TTGTGCTTGA TAAGCGCTTG CCGCAACAAT GGTATCCCGG TTTTGAGCCA
GATTTTAATA AGATGGAACC TGAACCCAGG CGTAACGGTA AAGCGGCACA AAAACAACGT
GCCAAAAAAC GCGCCTTCGG CAGTAAAAAG CCCTCTCGGT GA
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| Protein sequence | MSFSSLSLNT TLVNTITELG YSLPTPIQSE AIPVILAKQD VMAGAQTGTG KTAAFALPIL
HLLMAKNVEQ KAERVKTVQA LVLVPTRELA VQVHQSFVKY AKNTDIRIGI AYGGVSIDAQ
VDVFKTGIDV LIATPGRLLD HLRQGVLNLN QLSTLVFDEA DRMLDMGFMD EINAVLKQVP
KDRQTLLFSA TLDDAIFELS KSLLREPKLI EVTKRNTTAA QVEQRVYAID SDRKTEFVSH
LIRSNYWHQV LIFSRTKQGV DRLVQQLNKL SIVTHAFHGD LSQGAREKVL QAFKLGNIQV
LVATDVAARG LDIVELKYVI NFELPFIAED YIHRIGRTGR AGSAGLAITL FSQEDTLLLE
EVEVVLDKRL PQQWYPGFEP DFNKMEPEPR RNGKAAQKQR AKKRAFGSKK PSR
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