| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2690 |
|---|
| Symbol | |
|---|
| ID | 5080001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 3117192 |
|---|
| End bp | 3117482 |
|---|
| Gene Length | 291 bp |
|---|
| Protein Length | 96 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640499872 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001184208 |
|---|
| Protein GI | 146293784 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1872] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00251] conserved hypothetical protein TIGR00251 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.84388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCAG TCGTCCAGCA GCAAGGTGAC TTGCTGCTTA ATGTATATAT TCAACCAAAA
GCAAGCCGAG ATCAGATAGT TGGACTCCAT GGTGATGAGC TCAAAGTTGC GATAACAGCC
CCTCCGATAG ATGGCAAAGC CAATGCTCAT TTGAGTAAAT ATTTAGCCAA GGCATTTAAA
GTGCCAAAGA GTGATGTGTA TATCATTAAA GGTGAGCTTG GGCGCCATAA ACAAATCCGA
ATCGTGACCC CAAAACTGAT CCCACCTGAA GTGAGTGAGC TTTTAGAATA A
|
|---|
| Protein sequence | MSAVVQQQGD LLLNVYIQPK ASRDQIVGLH GDELKVAITA PPIDGKANAH LSKYLAKAFK
VPKSDVYIIK GELGRHKQIR IVTPKLIPPE VSELLE
|
|---|
| |