| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2685 |
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| Symbol | |
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| ID | 5079996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3112705 |
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| End bp | 3113817 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640499867 |
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| Product | twitching motility protein |
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| Protein accession | YP_001184203 |
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| Protein GI | 146293779 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTAC GTCCGTTTTT AAAAGTCATC GTTGAGCGTA AAGCCTCTGA TTTGTTTATT
ACCGCGGGCT TTCCTCCCAG TGCAAAAATT GATGGCGAAT TACGTCCCCT CGCCGAGAGT
GCATTTACGC CTGCACAGTC TTTAGATTTT GTTGAGTCAC TCATGACTGA AGCGCAGAAA
CAGGAATTTC ACTCAACCCG TGAATGTAAC TTTGCTTTTG CGGCAAAGGA TCTCGGTCGT
TTCCGAGTCA GCGCTTTTTG GCAAAGGGAA TCTCCAGGAT GTGTTATGCG CCGGATTGAG
ACCAGAATTC CCGAAGTCGA TGACTTAAAA TTACCTCCTA TTTTAAAAGA TCTGGTGATG
AGCAAGCGTG GGCTTATCAT TATGGTCGGC GGCACTGGTA CGGGTAAGTC AACCTCATTA
GCAGCATTGG TTGGATACCG TAATGCCCAT GCCCGTGGCC ATATATTGAC GATTGAAGAT
CCTGTTGAAT TTGTTCACGA TCATAGAAAA AGCATTATCA CCCAGCGTGA AGTAGGCATA
GATACGGAGT CATTCGATGC GGCATTAAAA AGCTCCCTTC GTCAGGCACC CGATGTGATC
TTAATCGGTG AAATTCGTAC CCAAGAGACG ATGGAATTTG CATTGTCGTT TGCAGAAACA
GGTCATCTTT GTATGGCAAC CCTACATGCC AATAATGCGA ACCAAGCACT CGATCGGATT
ATGCACTTAG TGCCTGAGAG TAAACATCAG CAGTTACTAT TTGATTTATC CTTAAATTTA
CGTGGTATTG TGGCGCAGCA ATTGATCCCC AAAGTCGATG GAACGGGGCG CCGCGCCGCG
ATTGAAGTAT TAATTAATAC TCCAAGGGTA GCGAGTTTAA TTGCCAAAAA TGAGCTGCAT
TTACTCAAGG AAACCATGGC AAAATCGAAT GAACAGGGGA TGCAGACATT CGACCAAGCG
TTACTGAAAT TATATGTTGA TGGTGAAATT AGTTATGCCG ATGCCTTACA CCATGCTGAC
TCACCAAACG ATTTACGTTT GATGATCAAA TTACAAAATA AAGAGCCTAC TGGTTCAAGT
TTTATGGAGG GCGTAACACT CGATATGGAT TAA
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| Protein sequence | MDVRPFLKVI VERKASDLFI TAGFPPSAKI DGELRPLAES AFTPAQSLDF VESLMTEAQK
QEFHSTRECN FAFAAKDLGR FRVSAFWQRE SPGCVMRRIE TRIPEVDDLK LPPILKDLVM
SKRGLIIMVG GTGTGKSTSL AALVGYRNAH ARGHILTIED PVEFVHDHRK SIITQREVGI
DTESFDAALK SSLRQAPDVI LIGEIRTQET MEFALSFAET GHLCMATLHA NNANQALDRI
MHLVPESKHQ QLLFDLSLNL RGIVAQQLIP KVDGTGRRAA IEVLINTPRV ASLIAKNELH
LLKETMAKSN EQGMQTFDQA LLKLYVDGEI SYADALHHAD SPNDLRLMIK LQNKEPTGSS
FMEGVTLDMD
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