| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2675 |
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| Symbol | |
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| ID | 5079986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3105676 |
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| End bp | 3106503 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640499857 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001184193 |
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| Protein GI | 146293769 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00133263 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATC TAGAGGGTTT ATTAAATCAA GCACCAGAAT TATTGATGGC CTATGGTCTA
AAAACTCTGT TCGCTATTAT TATCTTTTTT GTCGGTAAAT ATTTTTCAGG CGTAGCGCAA
AAGGTTATAC GTAAATTACT AAACAGCCGT AAAGTTGATC CAACTGTTGT ATCTTTTGTT
GCAAACTTAA CCTGGGCGAT TGTGTTTGTC TTTACTATTA TTGCAACATT AGGGCAAATT
GGCGTACAAA CAGCATCACT TGTTGCCGTT ATCGGTGCAG CAGGTCTAGC TGTAGGTTTA
GCGCTACAAG GTTCATTATC TAATTTTGCA TCTGGCGTCT TAATGGTATT ATTCCGTCCA
TGCCGTGTAG GTGATTATAT TGAAGCCGCT GGTATTGCTG GTACTGTGGA TGAAATCACT
ATTTTTTCAA CAAAACTACG CACTCCTGAT AATAAAGTTA TTGTGGCACC AAACTCCTCA
ATTATGAATG GCACTATCAC GAACTACTCA GCCTTAGAAA ATCGCCGTAT CGATCTTGTT
ATCGGTGTAT CTTATAAAGC AGATATTGCA TTAACTAAAA AAGTATTAAC AGATATCTTA
GATAACAACC AATATGTACT AAAGGATCCG TCCTATACCG TTGGATTATC TGAACTGGGA
AATTCCTCTA TTAATTTTGT AGTTCGTCCT TGGGTTAAAA CGCCTAATTT TTGGGCTGCA
CGTTTTGAGA TCCTTGAGCA AATAAAAAAT GCTCTGGATG CCGCTAATAT TGAAATTCCA
TTTCCGCAAA TGGATATTTA TGTAAAGCAA TTACCTGAAA ATAAATAA
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| Protein sequence | MENLEGLLNQ APELLMAYGL KTLFAIIIFF VGKYFSGVAQ KVIRKLLNSR KVDPTVVSFV
ANLTWAIVFV FTIIATLGQI GVQTASLVAV IGAAGLAVGL ALQGSLSNFA SGVLMVLFRP
CRVGDYIEAA GIAGTVDEIT IFSTKLRTPD NKVIVAPNSS IMNGTITNYS ALENRRIDLV
IGVSYKADIA LTKKVLTDIL DNNQYVLKDP SYTVGLSELG NSSINFVVRP WVKTPNFWAA
RFEILEQIKN ALDAANIEIP FPQMDIYVKQ LPENK
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