Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2673 |
Symbol | |
ID | 5079984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3103713 |
End bp | 3104726 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640499855 |
Product | threonine aldolase |
Protein accession | YP_001184191 |
Protein GI | 146293767 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000371505 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGATT TACGCAGTGA TACTGTTACC CAGCCGACTG AAGCCATGCG GTTAGCTATG TCCAGAGCTG AAGTCGGAGA CGATGTATAT GGTGATGATC CTACCGTAAA CAGCTTACAG GATATGGCTG CTGAGATGTT TGGTTTTGAG AGTGCGCTGT TTACGGTTTC TGGCACTCAA GCAAATTTAC TTGCTTTAAT GGCTCATTGT GAGCGTGGGG ATGAGTATTT GTGCGGCCAA CAGGCGCATA ATTATAAATT TGAGGGCGGT GGTGCTGCAG TTTTAGGCAG TATTCAGCCG CAGCCATTGA TAAATCAATT GGACGGCACT ATTGCGCTTG CAGACATAGA GGCTGCGATT AAACCTGATG ATATCCACTT TGCTCGCACC CGTTTATTGA GTTTAGAAAA CACCATTGCG GGTAAAGTAT TACCGCAGAC CTATCTGGCA AATGCACAGG CTTTAGCTTT TCATCGTGGT TTGAAAATTC ACCTTGATGG GGCGAGAGTA GCCAATGCTG CGGTAGCACA AAATATCCCT ATTAGTGATA TCACTGCGCA TTTTGATTCC GTTTCCATCT GCCTTTCAAA GGGGCTTTGC GCGCCCGTGG GTTCATTACT CTTAGGTGAT GAGCGTTTGA TTAAAAAGGC AATACGTTGG CGTAAAATGC TTGGCGGTGG TATGCGTCAA GCGGGGATAT TAGCTGCTGC AGGTAAACTG GCATTGACAG AACAAGTAGA GAGACTTGCT GAAGATCATG AAAGTGCAAC TTATTTTGCC CAGAAATTAA CCGAGTTTGC CGAATTTGAG GTTGATTTAA CCACGGTACA AACCAATATG GTGTTTGCGA CTTTGGCGCC GCATATTGAC GCTATGTTAT TGGCCAAACG GTGCCAAGAG GCTGGGATTT TAATTAGCCC TGGACGGACA ATTCGTTTCG TTACACATAA GGATGTTACT CGTCAGGATA TTGATAAAGT GCTAAATATC TTTAAGTTAC ATTTTCAAGC GTAA
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Protein sequence | MIDLRSDTVT QPTEAMRLAM SRAEVGDDVY GDDPTVNSLQ DMAAEMFGFE SALFTVSGTQ ANLLALMAHC ERGDEYLCGQ QAHNYKFEGG GAAVLGSIQP QPLINQLDGT IALADIEAAI KPDDIHFART RLLSLENTIA GKVLPQTYLA NAQALAFHRG LKIHLDGARV ANAAVAQNIP ISDITAHFDS VSICLSKGLC APVGSLLLGD ERLIKKAIRW RKMLGGGMRQ AGILAAAGKL ALTEQVERLA EDHESATYFA QKLTEFAEFE VDLTTVQTNM VFATLAPHID AMLLAKRCQE AGILISPGRT IRFVTHKDVT RQDIDKVLNI FKLHFQA
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