| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2654 |
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| Symbol | |
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| ID | 5079965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3084768 |
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| End bp | 3085556 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640499838 |
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| Product | type IV pilus biogenesis/stability protein PilW |
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| Protein accession | YP_001184174 |
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| Protein GI | 146293750 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCATG GATTGTCAGG GTTTTCATTA GCAATCACCT TGTCATTAGT CATGACAGGG
TGTGTCACTG AGCGTACATA CACAGGAACA GATATCCCTG TATCAGAGCG AAAATTAGAT
AGAGTCGCCG CGGCACGGGA GCGAATGCAG CTCGGTTTAA CCTATTTGAA TCGAGGTAAC
TCGGAACAAG CCAAATATAA CCTTGATAAA GCAATAGAAT ACGCGCCAGA ACTTGAAGAT
GTTCATGTTG CAATGGCCTA TTACTATCAA ACCGTGGGTG ATCTTGTACG TACCGAACAA
GCGTATCAGA AAGCCATTAG TACTAAGGAC GCCTCTGGCG ATTCCATGAA TAATTTTGGG
GTGTTTTTGT GCCAGCAAAA GCAATACGAA AAAGCTGAAA AAATGTTTTT GGCCGCAATA
GAAATGCCCA AATATACGCG CACCGCTTCG AGCTATGAAA ATTTAGGTTT ATGTAGCCGA
GAGTCGGGAA AAGCAGAAAA GGCACGACAG TATTTTCAGA TGGCGTTAAA GTATGACCCG
AGACGTTCGG TGTCATTGCT GGAGCTTGCT GAGCTTGAGA CTGAACAGGG TGATTTTATT
CAAGCGCGTA ATCAATTAGC GCGATATCAC CAAGTGGCAG CTCAGACTCC AGAGAGTTTA
GCGCTCGGAA TAAAAATAGA GCAGGCAATG AATGATGATG CTGCCGTTAA GAAATTTGGT
ATTTTATTGC TTGCCAAATT TCCAGCATCA CCTCAGGCCA AGCAATACAG AGTTAATTTG
CATCAATGA
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| Protein sequence | MKHGLSGFSL AITLSLVMTG CVTERTYTGT DIPVSERKLD RVAAARERMQ LGLTYLNRGN
SEQAKYNLDK AIEYAPELED VHVAMAYYYQ TVGDLVRTEQ AYQKAISTKD ASGDSMNNFG
VFLCQQKQYE KAEKMFLAAI EMPKYTRTAS SYENLGLCSR ESGKAEKARQ YFQMALKYDP
RRSVSLLELA ELETEQGDFI QARNQLARYH QVAAQTPESL ALGIKIEQAM NDDAAVKKFG
ILLLAKFPAS PQAKQYRVNL HQ
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