| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2651 |
|---|
| Symbol | hisS |
|---|
| ID | 5079962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 3081113 |
|---|
| End bp | 3082390 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640499835 |
|---|
| Product | histidyl-tRNA synthetase |
|---|
| Protein accession | YP_001184171 |
|---|
| Protein GI | 146293747 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAAAC AGATCCAAGC GATTCGCGGA ATGAATGACA TTCTGCCAAC CCAAAGTCCT
CTATGGCAAA AAGTAGAAGC GGTACTTCGT TCAAGCGTCA GTGCTTATGG TTACAGCGAA
ATCCGTACTC CAATAGTGGA AAATACCGAT CTTTTTAAAC GCTCTATCGG TGAAGTGACT
GATATTGTTG AAAAAGAAAT GTACACTTTC GAAGACCGTA ATGGCGATAG CCTGACCTTA
CGTCCCGAAG GTACCGCCTC TACTGTGCGT GCGGGTAATG AGCATGGTTT GCTCTATAAC
CAAGAACAGC GCTTGTGGTA TATGGGGCCA ATGTTCCGCC ATGAACGTCC ACAAAAGGGG
CGTTACCGTC AATTCCACCA ATTTGGTGTT GAAGTTTATG GTATTGGCAG CGCAGATATT
GACGCCGAAG TGCTTATGTT ATCGGCGCGT CTATGGGAAA AGCTGGGGAT TAGCGAACAT
GTGACGCTTG AGCTTAATAC CTTAGGTGAT CCCGCTGAGC GTGCGGCTTA CCGCGATGCC
TTGATTGCTT TTTTAGAGCA GCATAAAGAT AAGTTAGATG AAGACAGTCA ACGCCGTATG
TACAGCAATC CACTGCGCGT ACTGGATTCT AAAGATCCTC AAGTTCAGGG GATTTTAACC
GATGCGCCAG CGCTGATGGA TTACTTAGGT GAAGAATCTT CACAACATTT TGCACAATTA
CGTGAACTCC TAGACGCCGT TGGCATCCAA TACCGAGTTA ATCCTCGCTT AGTCCGTGGT
CTCGATTATT ATAATCGCAC TGTATTTGAA TGGGTTACCA ACAGCTTAGG CTCACAAGGC
ACGGTACTTG CGGGCGGACG CTATGATGGT TTAGTGGCGC AATTAGGCGG TAAAGATACC
CCAGCGGTCG GTTTTGCGAT GGGGCTTGAG CGTATTGTAT TGCTGCTTGA AACCTTGGGC
CTTACACAGG ACATTCCCGC GGCAGTTGAT GTGTATGTCA CCGCCATGGG GGAGAATTGT
CTTGTCGAAG CCATTAAAGT TGCACAGGAA TTACGTAGTG CGCTGCCACA CCTTAAAGTG
ATGAGTCACT GTGGTGGCGG TAACGTGAAG AAACAAATGA AGCGCGCCGA CAAAAGCGGT
GCGAGTGTGG CATTACTGAT AGGTGAAGAA GAACTTGCCG AAGGTATGGT CACAGTGAAA
CATTTACGCA ATGACAACGA ACAACAACAG GTTGCTCGAA ATGCCTTAAG TGCATTTTTA
GCTGAACTTA CCAAATAA
|
|---|
| Protein sequence | MAKQIQAIRG MNDILPTQSP LWQKVEAVLR SSVSAYGYSE IRTPIVENTD LFKRSIGEVT
DIVEKEMYTF EDRNGDSLTL RPEGTASTVR AGNEHGLLYN QEQRLWYMGP MFRHERPQKG
RYRQFHQFGV EVYGIGSADI DAEVLMLSAR LWEKLGISEH VTLELNTLGD PAERAAYRDA
LIAFLEQHKD KLDEDSQRRM YSNPLRVLDS KDPQVQGILT DAPALMDYLG EESSQHFAQL
RELLDAVGIQ YRVNPRLVRG LDYYNRTVFE WVTNSLGSQG TVLAGGRYDG LVAQLGGKDT
PAVGFAMGLE RIVLLLETLG LTQDIPAAVD VYVTAMGENC LVEAIKVAQE LRSALPHLKV
MSHCGGGNVK KQMKRADKSG ASVALLIGEE ELAEGMVTVK HLRNDNEQQQ VARNALSAFL
AELTK
|
|---|
| |