| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2649 |
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| Symbol | |
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| ID | 5079960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3079280 |
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| End bp | 3080467 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499833 |
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| Product | outer membrane protein assembly complex subunit YfgL |
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| Protein accession | YP_001184169 |
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| Protein GI | 146293745 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCTT GGTGCAAAAA CCTGTTAGCC GCTGGATTGA GTCTAGCGAT GTTATCCGCC
TGTTCATCGA GTGATGTTGA AGAAGAGCCG GTAAGTGAGT TAACTGCAAT TCAGGCAACG
GTGTTTCCTG AAGTAAGTTG GAGCGCCTCT GTTGGTAGTG GTGTGGGGGA TTATTATTCT
CGCCTTATGC CGGCAGTTCG TTACGGTAAA ATTTTTGCCG CAGACCGTTA CGGTAAAGTC
ATTGCGTTTG ATGAAGCTAC GGGTGACCGC GTTTGGACTA AAGATTTTAG CGAAGAGTTT
CGTGATAACG CCTTAGCTAA AAATAAAGGT GCTCGCATTG CCGCAGGTGT CACCGCTGCC
CGTAATAAAG TCTTTGTGGG TGGTGAGAGT GGGCTGCTTG CAGCACTGAA TATCGAAGAT
GGCCAAGTAT TGTGGCATAT CGTTGCGGGT GGTGAGCTTT TATCAAAGCC AACGGTTGCT
GATGATGTGG TTGTGGTGAG TACGAGCTCC GGTTCACTCG AGGCTTTTAA CGTCGATACT
GGCGATAAGC TGTGGGTGTA CAAGATGCAG TTGCCGAACC TGACGTTACG TGGCACAGGC
TCTGCCGCCT ATGAAGCGGG TGGTTTCTTT ATTGGTACTG CCGATGGCAA AGTGGCTGTT
GTGGTGAAAA ACAATGGTCA AGCCGCGTGG GAACAAGCGA TTTATAATCC AACGGGCGGT
AACGAGTTTA CGCGTATGGC CGACGTGGAT ATGACACCGC TTATTCTTGG TGATAATTTA
TATGCAGTTA GCTATAACGG TAACTTAGTG TCGATGGAAT TGCGTACGGG TCGCATAGTA
TGGACACGTA AGTATTCAAG CTTTAACGAA TTAGCATCAG CAGGATTAAG TTTGTTTTTA
GTTGACGATC ATAGTCGTAT CTACTCAGTT GATAGACGAA ATGGTTTAGA GCTATGGAGC
AACTCTGAGT TAACAAATCG AACATTAACC TCGCCTGCAG TTTATAAAGA TTATTTAGTT
GTCGGTGACT TCGAAGGTTA TCTACACTTT ATTGATCGCA GTACAGGGAC GATTGTCGGT
CGTATTCAAG TCGATAGCTC TGGATTATAC AGTCAGCCAT TAGTGGTGGA TGATAAAATC
TATGTTCAAG GTCGCAGCGG AAAGCTGGCT GTTGTAACAC TTCCGTAG
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| Protein sequence | MKSWCKNLLA AGLSLAMLSA CSSSDVEEEP VSELTAIQAT VFPEVSWSAS VGSGVGDYYS
RLMPAVRYGK IFAADRYGKV IAFDEATGDR VWTKDFSEEF RDNALAKNKG ARIAAGVTAA
RNKVFVGGES GLLAALNIED GQVLWHIVAG GELLSKPTVA DDVVVVSTSS GSLEAFNVDT
GDKLWVYKMQ LPNLTLRGTG SAAYEAGGFF IGTADGKVAV VVKNNGQAAW EQAIYNPTGG
NEFTRMADVD MTPLILGDNL YAVSYNGNLV SMELRTGRIV WTRKYSSFNE LASAGLSLFL
VDDHSRIYSV DRRNGLELWS NSELTNRTLT SPAVYKDYLV VGDFEGYLHF IDRSTGTIVG
RIQVDSSGLY SQPLVVDDKI YVQGRSGKLA VVTLP
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