| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2643 |
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| Symbol | |
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| ID | 5080696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3070471 |
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| End bp | 3071904 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499827 |
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| Product | putative transglycosylase |
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| Protein accession | YP_001184163 |
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| Protein GI | 146293739 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCGAT TTCTGCTTAT TATCATCTTA GGTTTCTTAC TGACTGCCTG TCAGCAGGTG
ACCGTGGACG AACCAGAATT CGTTCCTCAT CAGCTCACTG AACTGCGAGT GGGAACCCTT
TATGGCCCTC AGATCTATAT GACATCCGGC CAAGGAAATA GTGGATTTGA CTACGATATG
GCGCTGCGAT TTGCCGAATA TCTCAACGTC CCCTTAAAAA TGGTGCCTTA TACTAACCGC
TCAGAGCTCT ATGACGCCCT AAAAAAGAAT GATATTGATA TTATTGCCGC AGGTATGACA
GAAACGCCTG CGCGAAGAGA ACAATTCCGT CTAGGCCCAC CTTTATATCG CGTTAATCAA
GTGCTCGTTT ATCGAGAAGG CGTGGCAGCT CCCAAAGATA TCAGCAAGTT AAAAGGAAGA
ATCACTATCA TTGCTGACTC AGCGTTTGTA GAGACATTGA CTCAACTGCA AAAACATCAT
CCGAGTTTAG TCTGGGATCA AGTAACAGAT AAAGACAGTG AAGAGTTGCT GGCGATGATC
GCGAATAAAG AAATTGATTA CACCATCGCC GACTCCAGCA GTGTGCAAAT TAACCGTCGT
TATCTACCCG ATTTACGTTC TGGCCCTGTG CTTGAAGAAA AACTCGATGT GGTCTGGTTA
TTACCACCGA CTCACAGCGA TGCACTTATG AGCCAATTAT TGGCTTTCTG GCATCAAGAA
AAGCTCGCAG GGACGCTCGA TCATCTCAAT GAAAAGTATT TTGGCCACGT TAAACGTTTC
GATTATATCG ATACTCGTGC TTTCCTGCGT GCTATCGAAA CAGTCCTTCC TCGTTATCGT
CAACTGTTTG AGACCCATGC AGGTGATTTA GATTGGCGTA AACTTGCAGC AACAAGTTAC
CAAGAATCCC ACTGGAATCC GCATGCCCGC TCCCCCACGG GAGTCCGTGG CATGATGATG
CTCACAGAAC CCACAGCCAA AGAAATTGGC ATCACTAACC GCCTCGATGC AGAAGAAAGT
ATCCGCGGAG GCGCCGCATA TCTAAGGGAT ATGATTAACC GTTTGCCCGA ATCCATCCCT
GAAAGTCAAC GTATGTGGTT TGCACTAGCC TCTTACAATA TAGGGTATGC CCATGTGGAA
GATGCGCGAA AACTCGCAGA ATCAATGGAA TTAAATCCCA ATGCTTGGCG AGATCTAAAG
AAAGTTTTAC CTCTACTACA AAAACGGAAA TATTACCAAA AAACCCGTTA TGGTTATGCT
CGTGGCAGTG AAGCTGTACA TTACGTGGAT AGTATTCGCC GCTACTACGA TACATTGGTG
TGGGTGGATA ATCAGTCAAA ACAGCCTATG CCAGAGGACG AGCAAAACGA TCTTATTGCT
GAAGAACTCC CCAGTATGCC TGCAGGCTCC CTTAGCCCAG ATCAACCTAA ATAA
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| Protein sequence | MTRFLLIIIL GFLLTACQQV TVDEPEFVPH QLTELRVGTL YGPQIYMTSG QGNSGFDYDM
ALRFAEYLNV PLKMVPYTNR SELYDALKKN DIDIIAAGMT ETPARREQFR LGPPLYRVNQ
VLVYREGVAA PKDISKLKGR ITIIADSAFV ETLTQLQKHH PSLVWDQVTD KDSEELLAMI
ANKEIDYTIA DSSSVQINRR YLPDLRSGPV LEEKLDVVWL LPPTHSDALM SQLLAFWHQE
KLAGTLDHLN EKYFGHVKRF DYIDTRAFLR AIETVLPRYR QLFETHAGDL DWRKLAATSY
QESHWNPHAR SPTGVRGMMM LTEPTAKEIG ITNRLDAEES IRGGAAYLRD MINRLPESIP
ESQRMWFALA SYNIGYAHVE DARKLAESME LNPNAWRDLK KVLPLLQKRK YYQKTRYGYA
RGSEAVHYVD SIRRYYDTLV WVDNQSKQPM PEDEQNDLIA EELPSMPAGS LSPDQPK
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