| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2629 |
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| Symbol | |
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| ID | 5080682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3048400 |
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| End bp | 3049395 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640499813 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001184149 |
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| Protein GI | 146293725 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | [TIGR03589] UDP-N-acetylglucosamine 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATA ACAAAACAAT TTTGATTACC GGTGGCACTG GGTCATTTGG ACAAAAATAC
ACCAAAACCA TTCTTGAACG GTATAAACCG AAGCGGTTGA TCATTTTTTC CCGAGATGAA
TTAAAGCAGT ATGAGATGCA GCAAGTGTTT AACGCGCCAT GTATGCGTTA TTTTATTGGT
GACGTGCGTG ATGGTGAGAG ACTAAAGCAG GCCTTCAAAG ACGTCGATTT TGTGATCCAT
GCCGCTGCAC TTAAGCAGGT TCCCGCTGCT GAATACAATC CTATGGAGTG TATAAAAACC
AATATTCATG GAGCCGAAAA TGTGATCCGG GCAGCCATCA GTAATAATGT TAAGAAGGTT
ATTGCTCTCT CAACTGACAA AGCTGCAAGC CCAATTAATT TATACGGTGC AACTAAACTG
GCCTCCGACA AACTCTTTGT TGCCGCTAAT AACGTAGTCG GTGATGGTAA AACCCGTTTT
TCTGCAGTTC GTTATGGTAA TGTCGTTGGC TCGCGAGGCT CGGTTGTGCC TTTCTTTAAA
CAACTGATCG CCAATGGGGC GACTTCGCTG CCCATTACGC ATCCCGATAT GACACGTTTT
TGGATTACAT TACAAGATGG TGTTGATTTT GTTTTGAAAA ACTTTGCTCG AATGCAAGGT
GGTGAAATTT TCGTGCCTAA AATTCCTTCT ATTCGTATCA CTGATCTTGC CGCAGCCTAT
GGGCCGAATT TGGAGCAACA GATTGTAGGT ATTCGTCCGG GTGAGAAAAT GCATGAGGTG
ATGTGCCCTG GAGATGACTC ACACCATACC ATTGAGTTTG CTGACCATTT TGTGATAACG
CCAAGTATCA AGTTTTTTAG TCGTGAAAAC GACTATACAA AAAACTTGTT GAATGAAAAG
GGTCAAGCAG TTTCACAAGG ATTTGAATAC CACTCGGGTA ACAATCCACA TTTTTTAAGT
ATTGATGAAA TACTTAAACT GGATTCAATA TCATGA
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| Protein sequence | MFDNKTILIT GGTGSFGQKY TKTILERYKP KRLIIFSRDE LKQYEMQQVF NAPCMRYFIG
DVRDGERLKQ AFKDVDFVIH AAALKQVPAA EYNPMECIKT NIHGAENVIR AAISNNVKKV
IALSTDKAAS PINLYGATKL ASDKLFVAAN NVVGDGKTRF SAVRYGNVVG SRGSVVPFFK
QLIANGATSL PITHPDMTRF WITLQDGVDF VLKNFARMQG GEIFVPKIPS IRITDLAAAY
GPNLEQQIVG IRPGEKMHEV MCPGDDSHHT IEFADHFVIT PSIKFFSREN DYTKNLLNEK
GQAVSQGFEY HSGNNPHFLS IDEILKLDSI S
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