Gene Sputcn32_2628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2628 
Symbol 
ID5080681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp3047255 
End bp3048403 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content41% 
IMG OID640499812 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_001184148 
Protein GI146293724 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID[TIGR03588] UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCTTT ATGGAAAACA GGATATAAAT CAAGTTGATA TTGATGCAGT TATTAATGTG 
CTGCAGTCTG GCTTCCTTAC TCAGGGACCA AAAGTTACTG AATTTGAGCA AGCAATCTCT 
GAATATGTCG GTGCTAATTA TAGTGTTGCA GTCAACAGTG CTACTTCGGC ATTACATATC 
GCTTGTTTAG CCTTAGGTGT TGTGAGCAAT GATTTGGTAT GGACGACGCC TATTACCTTT 
GTTGCCTCGG CAAACTGTGC CCTTTATTGC GGTGCAGAGA TTGATTTTGT TGATGTTGAA 
CCTACGACGG GAAATATGTC GTCTTCGGCC TTATCTGCAA AGTTGCTCTT GGCTAATGCA 
AATGGTCGGT TACCAAAAGT GATCATCGCT GTGCATATGG CGGGACATTC TTGCAATATG 
CAAGCTATTG CGCAGTTGGC TAAACAGTAT GGCATTAAAG TGATTGAGGA TGCCTCCCAT 
GGCATTGGAG GATCTTACCA ATCAAAAAAA ATTGGAGCTT GCCAATATAG CGATATTACA 
ATTTTTAGTT TTCATCCGGT AAAAATAATT ACCACGGCTG AAGGCGGGGT TGCTACAACA 
AACAGTAAAC CTATTGCTGA CGCAATGGAA ATGTATCGAA GCCATGGTAT TACTAAAGAT 
CCTGCCTTAA TGGAAAGGCC GCAAGAGGGC GACTGGTATT ATGAGCAGCA CCATTTAGGT 
TTCAATTATC GGATGACGGA TCTGCAAGCT GCTCTCGGAG TGTCTCAATT AACTCGGATA 
AACGAGTTTG TGGAAAAACG TAATATATTA GCTGCAATAT ATCGTAGTCA ACTTACTGAC 
TTGCCTATCA ATATTGTTGA ACCAATAGAA CAATCCTACA GTGCAAGGCA TTTGTTTATC 
ATTAGGTTAT TACAACCTGA TAAACGTAAA GCGATTTTTG ACGCAATGCG TGCTCAAGGC 
ATTCAAGTGC ATGTGCATTA TTTTCCTGTT CATCTTCAAC CTTACTATCA GAAACTCGGG 
TTTAGTGTTG GACAATTTCC TGAGGCTGAG CGTTTCTATC GGTCGATACT GACGTTGCCT 
TTATATCCTA ATCTTACTGC TGAGCAGATT GGTTATATCT GTGACAACTT AAGGGAATTG 
TTGATATGA
 
Protein sequence
MILYGKQDIN QVDIDAVINV LQSGFLTQGP KVTEFEQAIS EYVGANYSVA VNSATSALHI 
ACLALGVVSN DLVWTTPITF VASANCALYC GAEIDFVDVE PTTGNMSSSA LSAKLLLANA 
NGRLPKVIIA VHMAGHSCNM QAIAQLAKQY GIKVIEDASH GIGGSYQSKK IGACQYSDIT 
IFSFHPVKII TTAEGGVATT NSKPIADAME MYRSHGITKD PALMERPQEG DWYYEQHHLG 
FNYRMTDLQA ALGVSQLTRI NEFVEKRNIL AAIYRSQLTD LPINIVEPIE QSYSARHLFI 
IRLLQPDKRK AIFDAMRAQG IQVHVHYFPV HLQPYYQKLG FSVGQFPEAE RFYRSILTLP 
LYPNLTAEQI GYICDNLREL LI