| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2622 |
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| Symbol | |
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| ID | 5080675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3042835 |
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| End bp | 3043581 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640499806 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001184142 |
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| Protein GI | 146293718 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACTAT TACGAGGTAA AAAAGCATTA GTAACTGGTG CCAATCGTGG TATCGGCCTA
GCTATTGCCC ATAAATTTGC TCAGCAAGGT GCTGAATTAT GGATAAATGG CCTCGATTCA
AACAAAATTG AGCAGGTAAG AGTTGAAATT GTTTCTAAGT ATGGTACAGA CTGCCACGCG
TTATGCTTTG ATGTATCGGA TCCACTTGCC GTAAAAGCAG GATTTCAGTA TTTATTTAAG
CAAACCAAAA CATTAGATGC ACTTGTTAAT AATGCTGGCA TTATGGATGA TGCTTTGCTC
GGTATGGTGA CTCATCAGCA GCTTGAACGA AGTTTTTCAA CTAACACTTA TAGTGTGATT
TATTGTACTC AGTATGCTGC CAGATTAATG GAGCGAGCAG GTTCCGGATC AGTTATCAAT
ATTGCCTCTA TCATGGGAAG AGTTGGAAAT GCGGGACAAT CTGTTTATGC AGGAAGCAAA
GCTGCGGTGA TAGGTATTAC TCAATCTTTA GCTAAAGAGT TAGCGAGTAA ACAAATCCGA
GTTAATGCCA TTGCGCCGGG GTTTATTGAA ACTGATCTCG TTAAGATATT AAACGAAAAT
ACCTATGAAA GCCGTTTGCA AAGTATAGCC ATGGGAAGAG CTGGTTTTGC TAGCGAAGTT
GCTGATGTAG CAGCATTTTT GGCCTCTAAT ATGGCAAGTT ATGTCACGGG TCAGGTGATA
GGTGTTGATG GGGGGATGCT TATTTGA
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| Protein sequence | MSLLRGKKAL VTGANRGIGL AIAHKFAQQG AELWINGLDS NKIEQVRVEI VSKYGTDCHA
LCFDVSDPLA VKAGFQYLFK QTKTLDALVN NAGIMDDALL GMVTHQQLER SFSTNTYSVI
YCTQYAARLM ERAGSGSVIN IASIMGRVGN AGQSVYAGSK AAVIGITQSL AKELASKQIR
VNAIAPGFIE TDLVKILNEN TYESRLQSIA MGRAGFASEV ADVAAFLASN MASYVTGQVI
GVDGGMLI
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